LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele06g0987	ATGGCCTCCTGCGACGACGACGACTTCTCCCTCCTCAGTGACGATCATCCCCAATCAAGCGCTGGCCCCCACCACCACCTTCACCAAACCTACGCACCACATTCCTTCTCATCCGCCGTCACGCCTGTGCCATCGGAACCGGTGGGCGAAGCCAGCGAAGTTTATGGATTTGATAACGATGCCGACGAGAGCGAAAAGCGAAACGATCGGGAGGAGGCCGGCGACGGGACGACGTCGTACGGGTGCAAAAGGCCCAAGCTTTCGAACGGCGGGGAGTATAGGAAGGATAGGGAGGAGTGGAGCGACGCGGCGATTGTTTGCCTTCTTGAGGCTTATACAGAGAAGTTCACCCAGCTGAATCGAGGAAACCTTAGAGGCAGGGATTGGGAGGAAGTGGCGGCAATAGTCAGTGAGCGATGCGAAAATCAAACCAAGAGTGTGGAGCAATGCAAGAACAAAGTCGATAATTTGAAGAAGAGGTATAAGCTGGAAAGGCACAGGATGAGCAATGGCTGCATTTCAGCCAGTCATTGGCCTTGGTTCAAGCAGATGGAACAGATCGTCGGCAATTCGCTTTCTACAAAGTACGTGCAGGATGAAGACAAGGGGATCGGTTCTGGGGGGAATTCGCCCAGACAACCAAAGAGATATGGAGTCACAATGCCCAGCAGTGGAGGTCAACTGAATAGCTTGAAGTCAAAACCAATGTCAAATGTTAGATGGCGAAGGGTGGTCTTCAAAATTAGTGGAGCAGCTCTTACTGGATCTGCTACCTGCAATATTGACCCAAAGGTGGCCATGTTAATTTCAAAAGAAGTTGCCATAGCCTCTCGCAATGGTGTGGAGGTGGCAATTGTTGTTGGAGGTCGTAACTTTTTCTGTGGAGATGCATGGGTAACTGCAACTGGTTTAGAAAGATGTACTGCATACCACGTTGGCATGATGGCTACTGTGATGAATTCTATATTGCTCCAATCAACTCTAGAGAAGATGGGTGTTCAAACTCGTGTACAAACTACCATTGCCTTGCATGAATTTGCTGAATCATACAATAGGCAACGGGCGATAAGACATCTTGAGAAAGGAAGAGTTGTTATATTTGGTGGCATTGGTTTTGGCACTGGAAACCCACTCTTTTCAACTGATATAGCTGCCGCTCTTCGAGCTTCTGAGATTAATGCTGAGGCTGTTCTTAAGGGTACTAATGTAGATGGTGTATATGACTGCAACTCCCGGGATGGCAATTTCACTTTTGAGCACATATCCTTCAGGGAGCTGGTTTCAAGAGGCGCCACCTCTATGGATATGACAGCGCTGACATTCTGTGAGGAAAATGCTATTCCTGTTGTGGTTTTCAATCTCCTGGAGCCCGGGAATATCTCAAAAGCTTTGTGTGGAGAACAAGTGGGTACACTAATTGACCAAACCGGTTCCATAAGCTGA	1443	0.4858	MASCDDDDFSLLSDDHPQSSAGPHHHLHQTYAPHSFSSAVTPVPSEPVGEASEVYGFDNDADESEKRNDREEAGDGTTSYGCKRPKLSNGGEYRKDREEWSDAAIVCLLEAYTEKFTQLNRGNLRGRDWEEVAAIVSERCENQTKSVEQCKNKVDNLKKRYKLERHRMSNGCISASHWPWFKQMEQIVGNSLSTKYVQDEDKGIGSGGNSPRQPKRYGVTMPSSGGQLNSLKSKPMSNVRWRRVVFKISGAALTGSATCNIDPKVAMLISKEVAIASRNGVEVAIVVGGRNFFCGDAWVTATGLERCTAYHVGMMATVMNSILLQSTLEKMGVQTRVQTTIALHEFAESYNRQRAIRHLEKGRVVIFGGIGFGTGNPLFSTDIAAALRASEINAEAVLKGTNVDGVYDCNSRDGNFTFEHISFRELVSRGATSMDMTALTFCEENAIPVVVFNLLEPGNISKALCGEQVGTLIDQTGSIS	480

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele06g0987	480	MobiDBLite	consensus disorder prediction	59	77	-	-
	Lele06g0987	480	FunFam	Uridylate kinase isoform A	233	479	-	-
	Lele06g0987	480	Gene3D	-	100	163	-	-
	Lele06g0987	480	SUPERFAMILY	Carbamate kinase-like	240	473	IPR036393	-
	Lele06g0987	480	Pfam	Myb/SANT-like DNA-binding domain	97	187	IPR044822	-
	Lele06g0987	480	Coils	Coil	140	167	-	-
	Lele06g0987	480	Hamap	Uridylate kinase [pyrH].	239	474	IPR015963	GO:0005737\|GO:0006221\|GO:0033862
	Lele06g0987	480	Gene3D	-	236	474	IPR036393	-
	Lele06g0987	480	PANTHER	URIDYLATE KINASE	93	479	-	-
	Lele06g0987	480	MobiDBLite	consensus disorder prediction	216	233	-	-
	Lele06g0987	480	Pfam	Amino acid kinase family	243	453	IPR001048	-
	Lele06g0987	480	CDD	AAK_UMPK-PyrH-Ec	242	474	IPR015963	GO:0005737\|GO:0006221\|GO:0033862
	Lele06g0987	480	FunFam	Aspartate/glutamate/uridylate kinase family protein	100	163	-	-
	Lele06g0987	480	MobiDBLite	consensus disorder prediction	199	233	-	-
	Lele06g0987	480	MobiDBLite	consensus disorder prediction	1	95	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele06g0987	Lele-ChrLele06	6129197	6133177	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele06g0987	71	191	Trihelix Transcription Factor Family	AT3G14180	39.024	7.40e-18	84.0

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	Trihelix	Lele06g0987		AA_kinase	2.1e-24	No_clan