Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0975 ATGGAAATGCCCGGTAGAAGATCCAACTACACCCTGTTGAGCCAAATTCCTGATGATCACTACGGCGGCGGAGCCGTGTCGTCTGGGACAGCTGCTACCTCTTCGTTGTTTGGTTCTTCATCTGGGGATGGAAAGAACATTAAAGGCAAATTGGACCGAGGTTTTGATTGGGACTTGAGTGCTGATCATAGAGTGACTCAGCAGGCGAACCGGATCGGACATTTGTTTCCATCGATCGGGTTGCAGAGGCAGTCTAGTGAGAGCAGTTTTGGCGAAAGCTCGTTATCAGGGGAGTATTATGCTCCGACTTCATCTACCGCAGCTGCCAATGAGATCGATGCCTTTGGGTATATGCAAGATGATGGAGCCAGGATTGGTGGAGGGGCTGGTGTTGGGGCCGACTTAAGACCGAGGTTGACGGAAACTACGGTGCGAACAGCAGGGTCGTCTTCAGTAAAAAGTTGGGCGCAGCAGACGGAGGAGAGTTATCAATTACAGCTAGCTTTGGCGCTTCGGCTTTCATCTGATGCAACCTGCGCTGATGATCCCAATTTTCTGGATCCAGTCCCAGATGAATCTGCTTTAATGTCGTCATCCTCAAGCTCTCCGGAGGCTATGTCACATAGATTCTGGGTTAATGGCTGCCTTTCATACTCCGACAAAATTCTTGATGGCTTTTACTTAGTTCATGGGATGGATCCCTATGTGTGGACTATGTGCACTGATCTGCAGGAAAATGGTCGAATTCCATCTGTTGAATCACTGAAGTCTGTGGATCCTGGTGTTGACTCTTCACTGGAAGTAGTTTTGGTTGATCAGCATAGTGATCCCAGCTTAAAGGAATTGCAAAATAGAGTGCATAGTATTTATTCCAGCTGTATAACCGCTAAAGAGGTTGTAGACCAGCTTGCCAAGCTGGTGTGCAACCGAATGGGGGGTTCAGCATCTGTTGGGGAGGATGACTTTCTTTCTATTTGGAGGGAGTGCAGTAATGATCTTAAAGATTGCTTAGGATCTGTTGTTGTTCCAATAGGCAGTCTTTCTGTTGGCCTCTGCAGACATCGTGCTACATTATTCAAAGTACTAGCTGACACCATTGATTTACCATGTCGGATTGCAAAGGGCTGTAGATATTGCTCTAGAGACGATGCTTCCTCTTGCCTTGTCCGTTTTGGACGTGATAGGGAATATCTGGTTGATTTAATTAGGAAACCAGGTTACTTGTGGGAGCCAGATTCCTTGCTCAATGGTCCATCTTCCATCTCATTTCCTTCACCCTTGTGCTTTCCAAGACTTAAACCAGCTGAACCTGCAAATGATTTCAGGTCACTGGCCAAACAGTATTTCTCTGATTGTCTGTCCCTTGAGCTTGCTTTTGACAATAATTCTGCAGAACAGCTCGATGGGAAGTGCAGGGACAGAAATAACCCTAGGTTAATTTCAAAGGAAAGCAACAGAACAAAAGATCAAGGTTCTGAAGCATTTAATTCTTGTAAACCTTCCCAGAACATTGCAGACTCCACCACTTTGGGCAAGGCTCCATTGCCTATAAATCATAACCTACCTGTTGGCCATGGAGATATTATGAAGGCTTTAGTACTTACAAATCCAAATATGGATGCTATTGAGGGTAGGCGGTTTGTTGATGGAAGTCAACTGGTTCCTAGTAAACCAAGCATAGAATTAGGCCTTGATATGGAGGATTTGGACATACCATGGAGTGATCTTGTTTTAAAAGAGCGAATAGGATCAGATGCTAGACAGTCAAAACTTTATTTACTCTGTAAGCGGTTCTTTGTTTCACCCTGTGGATTGTATGACTTTCTTAAGTATCCATTCATTCTTGTTGCAATAATGAAGAGGTTGAGACATCCAAACATTGTTTTATTTATGGGGGCAGTCACCCAGCCTCCAAACTTATCAATTGTCACAGAATACTTATCAAGGGGTAGCTTGTACAGACTGTTGCATAAACCTGGTGCCAAAGAGATGTTGGGTGAAAGGGTTAGACTCAGTATGGCTTATGATGTGAAGTCAGATGTTTATAGCTTTGGTGTAATCTTGTGGGAGCTTGCAACAATGCAACAGCCCTGGAGTAATTTGAATCCAGCACAGGTTGTGGCAGTTGTCGGTTTCAAGGGAAAAAGGCCTGAGATCCCACGAGATTTGAATCCTCAAGTAGCTGCAATAATTGAGGCTTGCTGGGCCAATGAGCCCTGGAAACGTCCTTCGTTTGAAAGTATCATGGATTCTTTGAGATCACTGATCAAACCCCCTGCACCTGAACCTGGTCGTCCACCATTACTTTCCTGA 2313 0.4492 MEMPGRRSNYTLLSQIPDDHYGGGAVSSGTAATSSLFGSSSGDGKNIKGKLDRGFDWDLSADHRVTQQANRIGHLFPSIGLQRQSSESSFGESSLSGEYYAPTSSTAAANEIDAFGYMQDDGARIGGGAGVGADLRPRLTETTVRTAGSSSVKSWAQQTEESYQLQLALALRLSSDATCADDPNFLDPVPDESALMSSSSSSPEAMSHRFWVNGCLSYSDKILDGFYLVHGMDPYVWTMCTDLQENGRIPSVESLKSVDPGVDSSLEVVLVDQHSDPSLKELQNRVHSIYSSCITAKEVVDQLAKLVCNRMGGSASVGEDDFLSIWRECSNDLKDCLGSVVVPIGSLSVGLCRHRATLFKVLADTIDLPCRIAKGCRYCSRDDASSCLVRFGRDREYLVDLIRKPGYLWEPDSLLNGPSSISFPSPLCFPRLKPAEPANDFRSLAKQYFSDCLSLELAFDNNSAEQLDGKCRDRNNPRLISKESNRTKDQGSEAFNSCKPSQNIADSTTLGKAPLPINHNLPVGHGDIMKALVLTNPNMDAIEGRRFVDGSQLVPSKPSIELGLDMEDLDIPWSDLVLKERIGSDARQSKLYLLCKRFFVSPCGLYDFLKYPFILVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKPGAKEMLGERVRLSMAYDVKSDVYSFGVILWELATMQQPWSNLNPAQVVAVVGFKGKRPEIPRDLNPQVAAIIEACWANEPWKRPSFESIMDSLRSLIKPPAPEPGRPPLLS 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0975 770 SUPERFAMILY Protein kinase-like (PK-like) 591 760 IPR011009 -
Lele06g0975 770 Pfam Protein tyrosine and serine/threonine kinase 673 752 IPR001245 GO:0004672|GO:0006468
Lele06g0975 770 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 668 755 - -
Lele06g0975 770 Pfam Ethylene-responsive protein kinase Le-CTR1 204 408 - -
Lele06g0975 770 Gene3D Phosphorylase Kinase; domain 1 615 648 - -
Lele06g0975 770 ProSiteProfiles Protein kinase domain profile. 484 756 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele06g0975 770 Gene3D Transferase(Phosphotransferase) domain 1 649 761 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0975 Lele-ChrLele06 6025866 6033531 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0975 660 765 MAP Kinase Kinase Kinase AT5G03730 69.811 4.95e-39 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Lele06g0975 EDR1 1.3e-82 CL0125