Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0974 ATGCTATTATTACTGTTACCGCCCCAAACTTATAAAAACCTGGGCAAATCGTTTACGCTGCCGACCAGGGCTTATCCTTCTTTTATCGGTTTTGCTTCTTGTGAACCAGTACACTGTTTGGTCCCCGCGATCAACATGAATCCGAACGACGAAGGAAAACCAAATTCTCCGAAGAGGTCGAAGGTTAAAGCTCCGGCTGATACGTATTGTTCGAGTCATTTGGAGCAGGAAACATATGGGTTCTCTCCCATGGAGTTGAGTTCTGCAGCATTCGGAGATGCCTCAGCGAGTCTTTCAATGGCGGACATTGGCCTTTCTGGCTATCCTCCTTCGTCTCTGTGTGATTTTTCAGTGGAGTTTAGAGAATTCTCAACCATGAGCCCGACATCTCTGGCTTCGCCTCCTCCTCCTGCTCCTGTTAGTGATGAGAGAGCTCCTTTGGTACCAGCAACTATTAAGGAGAAGGCCGGATTAATAGAAATAAGCGGTGGGTTGGAGGACGTTGATGTGCCACAGCCGCTTGATTGTTTACAGGAGAATCCGATTCCGCCATTTCTATGGAAAACTTACGATCTGGTGGATGATCCATCTCTGGATCCTATCATATCATGGGGCTCGGCCGGTGCTAGTTTCGTGGTATGGGACCCTGTGGAATTTGCGAGGATCGTCTTGCCAAGGAATTTCAAGCATAACAATTTCTCCAGTTTTATCCGCCAGCTAAATACTTATGGGTTCCGCAAGATTGACCCTGATAAGTGGGAGTTTGCGAATGAAGGTTTCAGGCGAGGGAAGAGACATCTATTGAAGAACATCCAAAGGCGCAGATCACTGCAATCCCAGCATGCTGGTAATGTTGTGCCATCCACTAAAGCAGGAAAGTCTGGAGTTGAGGTCGAGATAGAAAGACTGAGAGAGGAGAGAAGTATATTAGTCCAAGATTTGGTTGATTTGCAGCAACAACAGAGAAGGACAGTTCATCAAGCGGGACAAGTGAACCAGAAGCTTGAGTCTGCAGAGCAGAGACAGAAACAAATGGTTTCTTTCTTGTCAAAGTTATTTCAAAATCCAGCATTTTTAGCCCGCCTGAGGCAACGGAAGGAACCCACAGGTATAGATTCTCCAAGAGTGAGAAGGAAGTTTGTCAAGCAGCACCAACACGAAACAGGAACATCAGACTCTTTGAATGAAGGGCAGATTGTAAAATACCAACCTGATTGGAGAGACATTACCATCCCTTCAGAAACACCAGTACTAAATCCAATTTCTACTAAACAGTCTCCTGAGCACCCTTCACAGGATTGGACAAGAGAACTTGGTTCAGTAGCAGAAAATCTGTATGTGCAAGCTGATGTTGCTGCATCAGATGAATTGGCTGCAGCTAGTGAAATAATGACTACTCCAGATATCATGGGAGAAGGATCGTCAAGCTTAGGGCTTGAAGATCCTCTTTGGAAAGGGAAAAACGTCATGAGACCAGATCAAGAAGTTATCCCAGAGAATCTGACCAGGGAGAACAGTGTTTCAATGTTTTACCCGCCTGAAACTGAAAGCGTTATTAAACAAGATGTATGGAACCCGGGCTTTAATGTTAGCGGTGCTACTTCTAGCTCAGTGGATGAGCTGTGGGACAATCCAATTCCAATCAATTATGGAGTGCCAGAATTTGGAGTGACAGGTGGCATGTCAGACCTCTGGGATATAAGCTATATGCAAGAAACAGGAAATTCAGGTCTCGATGACGATAACTGGCCAACTGATGAGCTCCCTCCAAATGAAACAGAAGGTCAGGCTGATCGCCCAAAAGATGTATGCGACTCCAGTATTAGAAAGCCTCTTCTTTTGAGTTTTGATTGGCTTGTTTTTTGCATCGCCTATTTTGATACCAAAAGACAAGGGGAAATCCTGAAATGGATGTTCCTCTCTGTAGTGCCATCATCCGATGCCTTTGATGATGTATTTGAATCCATTAGTCATTAG 1977 0.4502 MLLLLLPPQTYKNLGKSFTLPTRAYPSFIGFASCEPVHCLVPAINMNPNDEGKPNSPKRSKVKAPADTYCSSHLEQETYGFSPMELSSAAFGDASASLSMADIGLSGYPPSSLCDFSVEFREFSTMSPTSLASPPPPAPVSDERAPLVPATIKEKAGLIEISGGLEDVDVPQPLDCLQENPIPPFLWKTYDLVDDPSLDPIISWGSAGASFVVWDPVEFARIVLPRNFKHNNFSSFIRQLNTYGFRKIDPDKWEFANEGFRRGKRHLLKNIQRRRSLQSQHAGNVVPSTKAGKSGVEVEIERLREERSILVQDLVDLQQQQRRTVHQAGQVNQKLESAEQRQKQMVSFLSKLFQNPAFLARLRQRKEPTGIDSPRVRRKFVKQHQHETGTSDSLNEGQIVKYQPDWRDITIPSETPVLNPISTKQSPEHPSQDWTRELGSVAENLYVQADVAASDELAAASEIMTTPDIMGEGSSSLGLEDPLWKGKNVMRPDQEVIPENLTRENSVSMFYPPETESVIKQDVWNPGFNVSGATSSSVDELWDNPIPINYGVPEFGVTGGMSDLWDISYMQETGNSGLDDDNWPTDELPPNETEGQADRPKDVCDSSIRKPLLLSFDWLVFCIAYFDTKRQGEILKWMFLSVVPSSDAFDDVFESISH 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0974 658 SMART hsfneu3 181 274 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele06g0974 658 Coils Coil 300 320 - -
Lele06g0974 658 Gene3D - 177 275 IPR036388 -
Lele06g0974 658 Pfam HSF-type DNA-binding 185 274 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele06g0974 658 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 171 403 IPR027725 -
Lele06g0974 658 ProSitePatterns HSF-type DNA-binding domain signature. 224 248 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele06g0974 658 PRINTS Heat shock factor (HSF) domain signature 185 208 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele06g0974 658 PRINTS Heat shock factor (HSF) domain signature 223 235 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele06g0974 658 PRINTS Heat shock factor (HSF) domain signature 236 248 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele06g0974 658 MobiDBLite consensus disorder prediction 575 602 - -
Lele06g0974 658 FunFam Heat shock transcription factor 1 178 275 - -
Lele06g0974 658 SUPERFAMILY "Winged helix" DNA-binding domain 181 274 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0974 Lele-ChrLele06 6017299 6020842 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0974 126 587 HSF AT5G03720 43.542 1.56e-100 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Lele06g0974 HSF_DNA-bind 1.2e-30 CL0123