Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0966 ATGGAAATGGAAGATCACCACAACACCCATCATCATCCCCAGCAATATGCCATGCCGGATCTCAGGCAGCTCATTAATGGAGCTCCCAGGCCCACTGCTACTCATTTCTCCTCCATTCCTCCCCAGGCAACGGCGGAGCTCTTCCAGCCTCACCGGAATCTCACGCCCGCCCACCATCAGCACTACGACATGATGATGTTCGGTCGTCATGTCGCCGATGTAATGCCTCGTGCCCTCCACGACTTTGCCTCCGATTCACCTCCCGCCGCCGCTCCACCCACTAACAATATTACTGTAGCCCCTCCGGCCACCACCGCCAGCGCTTTCACTTCTCCACTCAGTGGCTTAGAGGCCGAGACCCCAGGCTGCCTCGCCGGGGATGCCTCCACCGGAAGATGGCCAAGGCAGGAAACACTCACTCTCCTTGAGATCAGATCTCGTCTCGACCCTAAATTCAAAGAGGCCAATCAGAAGGGCCCCTTATGGGACGAAGTCTCTAGTTTTGTCAACTGTTTCCCGCTGGAAAATGACAACACTGGCTTCAGTGGGATATCCAGGATCATGTCGGAAGAATATGCATACCAAAGGAGTGGGAAGAAATGCAGGGAAAAATTCGAGAACTTGTACAAATATTACAAGAAGACAAAGGAAGGGAAGGCGAGGAGACAGGATGGGAAGCATTACAGGTTCTTCCGTCAACTTGAAGCTTTGTATGGAGGGAACAGCAACTCAACCTCAGTACCAGAAACTAATTATGGTAGCAGCGGAATTGGCTTTCAGCCACCCTCCCAAATAAATCAAGACATGTTTCAGTCTCACAACCACAAGACTTGCGATAGCCTCAGCCTCACTAACTCAACAGATTTCGGCACGTCATCATCGGAGGACAACAATCTTTGCAGCATGGAAAATGATTCCACGGAGAAGGGGAGGAAGAGGAGTAGTGGAAGCAGATGGAAGGCCAAAATAAAAGAGTTCATCGACTCACAGATGAAGAAGCTGATTGAGAAGCAAGAGGCGTGGATGGATAGGCTCGTGAAGACGCTTGAACTGAAGGAGAAGGAGAGGGTTTTAAGAGAGGAAGAATGGAGAAGACAAGAAGCTGCGAGGTTGGAAATGGAGCACAAGTTTCGGGCTAAAGAGAGAGCGTGGATTGAAGCAAGGGATGCTGCTCTAATGGTCGCCTTGCAGAAACTAACGGGAAGAGAGGTAAACGCTCAATCTCCTGTTGAGCAGGCTCTAATTATGGCTAACGAAATTCAGAATCATAGGGAAAACCAGAACGAAGAGGGAGGTGAAATCCTCAACGGTGGTCATAGAGCTGTTGAGAACTGGACAAAAAGTGAGATTACGATGCTCCTAGAATTGAGGGCGGAGAGGGAATCCGGGTTTCAGAAAAGTGGGTGTTCGGAAGAGGTTATGTGGGGGGAAGTAGCCAACAAAATGGCTTGCTTTGGCTACGAGAGGACTGCTTTGATGTGCAAACACAAGTGGGAAAGCATAATCAGTTATGCAACTGCCAAGGAAGGAATCAAGAAGCGCAAGGAAAAGTCTAGAAGCTGTTTTTATTTCGACAACATCATCAATGACCAGCCATCCTTGTATAACCAACAAGCAACTACTCCGTATTGTGATATGAACGTTAACGATCAACGGCACGACAATGAGAGGCTACAAACAAATGATGGCTCTTCGCCTTCAAATTCCAATGCGGTCACTGCTGACGTTAATTGCTTTCCCTTCTTTATTAGCACGGAAGGATCAGAAAATTTGTGGGAAAACTACGACATGAAGATTAATAAAGGAAATCAAAACCACCAGTGA 1824 0.4836 MEMEDHHNTHHHPQQYAMPDLRQLINGAPRPTATHFSSIPPQATAELFQPHRNLTPAHHQHYDMMMFGRHVADVMPRALHDFASDSPPAAAPPTNNITVAPPATTASAFTSPLSGLEAETPGCLAGDASTGRWPRQETLTLLEIRSRLDPKFKEANQKGPLWDEVSSFVNCFPLENDNTGFSGISRIMSEEYAYQRSGKKCREKFENLYKYYKKTKEGKARRQDGKHYRFFRQLEALYGGNSNSTSVPETNYGSSGIGFQPPSQINQDMFQSHNHKTCDSLSLTNSTDFGTSSSEDNNLCSMENDSTEKGRKRSSGSRWKAKIKEFIDSQMKKLIEKQEAWMDRLVKTLELKEKERVLREEEWRRQEAARLEMEHKFRAKERAWIEARDAALMVALQKLTGREVNAQSPVEQALIMANEIQNHRENQNEEGGEILNGGHRAVENWTKSEITMLLELRAERESGFQKSGCSEEVMWGEVANKMACFGYERTALMCKHKWESIISYATAKEGIKKRKEKSRSCFYFDNIINDQPSLYNQQATTPYCDMNVNDQRHDNERLQTNDGSSPSNSNAVTADVNCFPFFISTEGSENLWENYDMKINKGNQNHQ 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0966 607 CDD GT1 443 504 - -
Lele06g0966 607 MobiDBLite consensus disorder prediction 289 316 - -
Lele06g0966 607 Gene3D - 445 505 - -
Lele06g0966 607 Gene3D - 133 214 - -
Lele06g0966 607 ProSiteProfiles Myb-like domain profile. 444 502 IPR001005 -
Lele06g0966 607 Coils Coil 410 430 - -
Lele06g0966 607 Pfam Myb/SANT-like DNA-binding domain 444 526 IPR044822 -
Lele06g0966 607 Pfam Myb/SANT-like DNA-binding domain 132 237 IPR044822 -
Lele06g0966 607 PANTHER FI21293P1 110 559 - -
Lele06g0966 607 Coils Coil 351 371 - -
Lele06g0966 607 MobiDBLite consensus disorder prediction 242 263 - -
Lele06g0966 607 CDD GT1 132 216 - -
Lele06g0966 607 SMART sant 129 211 IPR001005 -
Lele06g0966 607 SMART sant 441 504 IPR001005 -
Lele06g0966 607 MobiDBLite consensus disorder prediction 289 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0966 Lele-ChrLele06 5977716 5980387 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0966 12 601 Trihelix Transcription Factor Family AT5G03680 43.740 6.36e-128 387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lele06g0966 Myb_DNA-bind_4 8.2e-13 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0966 06 5977716 5980387 Lele13g1689 13 25515797 25516342 CCT
Lele06g0966 06 5977716 5980387 Lele14g1629 14 23902249 23902794 CCT
Lele06g0966 06 5977716 5980387 Lele15g0728 15 4208018 4208563 CCT
Lele06g0966 06 5977716 5980387 Lele16g0733 16 4148732 4149277 CCT
Lele06g0966 06 5977716 5980387 Lele06g0966 06 5977716 5980387 ECH
Lele06g0966 06 5977716 5980387 Lele07g1141 07 6895575 6898253 hybridization
Lele06g0966 06 5977716 5980387 Lele08g0954 08 6022503 6023780 hybridization