Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0963 ATGGCTCGCCAGTTACAGCAGCTTCTCCAGGAAGATCAAGAACCGTTCCTATTAAACGACTACATTTCTGATAGGCGGAATCAGCTGATGAAAAGGCCTTCTCCCAACACCACTCTGCAACTCAAGAAACCAAAACCAATCCATCATCATAACTCAAGCTTCCCCCCTGATTTCTGTAAAAATGCTTTCTTTTTCTCCTTTCGTAACACCCCTGATCTCTTGGAATTCGCATCTCCGGCCAAGAGCCCCTGTAAGTCCCCCAATGCCATCTTCCTCCATATCCCTTCTCGAACAGCCGCGCTCCGTCGCGAAGCTGCTCTCCGAATTCAGAAACACTCCTCGTCTTCTAAATCTAAAACCCACAATAAGACCAACGGCTTTGGTTTATTCAGGTCATTATTCAAGAGACTAACGCCGAGAAACCGAAATAGAGAAATACAGGGCGGTGGTGATGACGGAGGCAAGAAAAATCAAGAACAAATGGTATATACTGATCAGTTGAACGTTCCATGTTCTTACAATGGACGACCTAGCAGTGCTGTATGGCCCGAAACCAATGAGGATAAATCTTTGGACATGGAAACGTGCAGCAGTACTAGCTACTCCGATGAATCCCACGAGGTTGACCTTGTGTCCAAATCCCACCAGAAACACGTTAGAGATTCTCATTGCTATGATCACGACTTCTGCGAAAGCCCTTTCCGCTTTGCATTACGGAGTAGCCCCTCTTCTGGCCACCAGACGCCGGAATTAATGTCACCGAGTCTACCCAGAGCAGAGGAGAAAGAAAAGAAGGGAACAGAGAGTGTCGAGAGATTGCAATTAAGGGAGGAAGAAGAGGAAGAGAAGGAGCAATTCAGTCCGGTGTCTGTTTTAGACCCACCCTTCGAGAACGATGACGAAGGGCATGAAAACAGCGACGAGGATGCCGGTTTTGATATGGAGTGCAGCTGTGCCATTTTACAGAGAGCGAAGCACCAACTGTTGTACAAGCTTCGTAGTTTTGAGAAACTTGCAGGATTGGATCCGATTGAACTTGAGAAAATAATGTTAGAGGAAGAAGATGAAGACGATGAGACATCAGATGAAGAGAAGGACTTTAACAGGTTAGTTTTAGAAGTCATCTGCCAATCTAGCATCCATGAGAAACAAGAGATCCCAGAAGATCACAAGAGACTGATTTTGGATCTCATTATGGAGGAAGAAAGAGAACTTAATTCCTCGGAGGAGAGGGAAATAGTGATAAGAAGGGTTTGCAAGAAGCTGGAATTGTGGAGAGAAGTGGAACATAAAACAATTGATATGATGATAGAACATGACTTTAGTAGAGAGGACGATGGATGGAAGAAAAAAGAAGAGCGCAAGAAGGAGGTGGCAGGGGAGCTCGAACGTGCTATTTTTGGGCTTCTAGTGGAAGAATTTTCAGAGGAGCTAGTGTGTTGA 1443 0.4525 MARQLQQLLQEDQEPFLLNDYISDRRNQLMKRPSPNTTLQLKKPKPIHHHNSSFPPDFCKNAFFFSFRNTPDLLEFASPAKSPCKSPNAIFLHIPSRTAALRREAALRIQKHSSSSKSKTHNKTNGFGLFRSLFKRLTPRNRNREIQGGGDDGGKKNQEQMVYTDQLNVPCSYNGRPSSAVWPETNEDKSLDMETCSSTSYSDESHEVDLVSKSHQKHVRDSHCYDHDFCESPFRFALRSSPSSGHQTPELMSPSLPRAEEKEKKGTESVERLQLREEEEEEKEQFSPVSVLDPPFENDDEGHENSDEDAGFDMECSCAILQRAKHQLLYKLRSFEKLAGLDPIELEKIMLEEEDEDDETSDEEKDFNRLVLEVICQSSIHEKQEIPEDHKRLILDLIMEEERELNSSEEREIVIRRVCKKLELWREVEHKTIDMMIEHDFSREDDGWKKKEERKKEVAGELERAIFGLLVEEFSEELVC 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0963 480 MobiDBLite consensus disorder prediction 256 287 - -
Lele06g0963 480 PANTHER OS04G0572500 PROTEIN 1 478 - -
Lele06g0963 480 MobiDBLite consensus disorder prediction 29 48 - -
Lele06g0963 480 MobiDBLite consensus disorder prediction 239 309 - -
Lele06g0963 480 MobiDBLite consensus disorder prediction 180 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0963 Lele-ChrLele06 5941611 5944763 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0963 3 297 TRM (TON1 Recruiting Motif) Superfamily AT5G03670 40.413 9.78e-44 157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g2051 13 27640019 27653630 Lele06g0963 06 5941611 5944763 CCT
Lele15g0355 15 2028189 2029552 Lele06g0963 06 5941611 5944763 CCT
Lele06g0963 06 5941611 5944763 Lele06g0963 06 5941611 5944763 ECH
Lele06g0963 06 5941611 5944763 Lele07g1138 07 6866777 6869424 hybridization
Lele06g0963 06 5941611 5944763 Lele08g0949 08 5988807 5991839 hybridization