Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0961 ATGGACTTCCATCTGAAGCAATGGAAAAACCACCACGAGTCTGAATCAGAAGAATATCACCTTGCAAAGATGCCCAGGCTCATGCTTGAATCCCGTCTACACCCACCACTGCATTCATCCCTCTCTTCCCCTGCTCTCCCTCTCTTTGTTCCCGAACTCAACACCAAAGTCGGCTCGCTCTCCGCGTTTTCTGATTCCTCGTTATCCCCCACCAGATTTCCAAGAATGGGGAGTTATTTCAGTGTGGCTCAGTGGCAGGAGCTGGAGTTGCAGGCACTGATATTCAGGTACATACTGGCGGGTGCTGTTGTTCCCCCTGAGCTTCTTCTGCCAATTAAGAAGAGCCTTCTTCATTCTGCTCCTTACTTCCTCCATTATCAGCCTTCTCGTGAGTTTCCCCTCTTCATTCTTTTAACTATCTCATTGTTGCAATCGGGATACTGGGGAGGAGCTACCATGGATCCAGAGCCCGGCCGATGCCGAAGGACTGACGGCAAGAAATGGCGGTGCTCGAGAGACGTGGTGGCCGGCCAGAAGTACTGTGAGCGCCACATGCATCGCGGTCGAAACCGTTCAAGAAAGCCTGTGGAAGTACCCACGCCAGCCACTGCTGGAGGCGTTGTCGGCGTCGGATGTCCCTCTGCCACAACAGCCTCTTCATCTGCTCCTCTGCATATGACACCAACAACGTTGAGATCCCCTTTCGATCTCCTTCAGCTGAAACGATGTTCATCTGGGACCATCAAGAATGAAAAGGAGAGGGTATTTGAAAACCAAAATCGGGGTCACGTGGACGGTGCGGGGAGATCAGATGGGCATATTCTGCGACATTTTTTCGATGATTGGCCAAGATCACTTCAGGAACCTGATAATGCCGAAAGTAACGCTAGCTCCATCAACTCGGCCACATGCCTTTCCATTTCAATGCCCGGAAATGCTTCGTCGGACGTGTCCCTGAAATTGTCCACGGGCGATGATACAGAGGATCCGTGCCCCAAAAGTGGGGATGTGGGCCCACAGCATTTGCAGTTGAATTGGGCGGGAGGATGGGCTTCTTCGGCTAACCATGTGGCTTCCATGGGAGGACCACTCGCAGAGGCTCTGAGATCATCCACCACAACGTCTTCACCCACAAGTGTCTTACACCAGTTGCCTCGTAGTTCTGCTTCTGAAACCAGCTTCATTATCACCTAG 1194 0.5201 MDFHLKQWKNHHESESEEYHLAKMPRLMLESRLHPPLHSSLSSPALPLFVPELNTKVGSLSAFSDSSLSPTRFPRMGSYFSVAQWQELELQALIFRYILAGAVVPPELLLPIKKSLLHSAPYFLHYQPSREFPLFILLTISLLQSGYWGGATMDPEPGRCRRTDGKKWRCSRDVVAGQKYCERHMHRGRNRSRKPVEVPTPATAGGVVGVGCPSATTASSSAPLHMTPTTLRSPFDLLQLKRCSSGTIKNEKERVFENQNRGHVDGAGRSDGHILRHFFDDWPRSLQEPDNAESNASSINSATCLSISMPGNASSDVSLKLSTGDDTEDPCPKSGDVGPQHLQLNWAGGWASSANHVASMGGPLAEALRSSTTTSSPTSVLHQLPRSSASETSFIIT 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0961 397 MobiDBLite consensus disorder prediction 316 335 - -
Lele06g0961 397 Pfam WRC 155 197 IPR014977 -
Lele06g0961 397 ProSiteProfiles QLQ domain profile. 79 114 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lele06g0961 397 SMART QLQ_2 78 114 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lele06g0961 397 MobiDBLite consensus disorder prediction 368 397 - -
Lele06g0961 397 Pfam QLQ 80 112 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lele06g0961 397 PANTHER GROWTH-REGULATING FACTOR 5 59 316 IPR031137 GO:0005634|GO:0006351|GO:0032502
Lele06g0961 397 ProSiteProfiles WRC domain profile. 154 198 IPR014977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0961 Lele-ChrLele06 5920027 5921971 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0961 1 384 GRF Transcription Factor Family AT3G52910 48.039 2.25e-91 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Lele06g0961 WRC 2.5e-22 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0961 06 5920027 5921971 Lele06g0961 06 5920027 5921971 ECH
Lele06g0961 06 5920027 5921971 Lele07g1136 07 6846562 6848498 hybridization
Lele06g0961 06 5920027 5921971 Lele08g0947 08 5968413 5970383 hybridization