Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0955 ATGAAGGTGATCGCTGCGTATTTGCTCGCCGTGTTGGGTGGAAACACTAGCACTTCAGCCGATGATATAAAACATATCCTTGGCTCAGTTGGAGCAGAAGCTGATGATGATAGAATTGAGCTTCTCTTGTCTGAATTGAAGGGTAGAGATATAACTGAGGTTATTGCCAGCGGTAGGGAAAAGTTGGCCTCAGTGCCTTGTGGTGGTGGAGCTGCAGTTGCAGTGGCTGCTGCGCCTGGAGCTGGTGCAGCCGCCGCCGCTCCAGCTGCTGAGTCAAAAAAAGAGGAGAAGGTGGAGGAGAAAGAGGAATCTGATGATGATATGGGCTTCAGCCTCTTTGACTAA 345 0.5014 MKVIAAYLLAVLGGNTSTSADDIKHILGSVGAEADDDRIELLLSELKGRDITEVIASGREKLASVPCGGGAAVAVAAAPGAGAAAAAPAAESKKEEKVEEKEESDDDMGFSLFD 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0955 114 MobiDBLite consensus disorder prediction 85 114 - -
Lele06g0955 114 Hamap 50S ribosomal protein L12 [rpl12]. 2 114 IPR027534 GO:0003735|GO:0005840|GO:0006414
Lele06g0955 114 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER 1 114 IPR044076 GO:0002182|GO:0003735|GO:0022625
Lele06g0955 114 Gene3D - 1 59 IPR038716 -
Lele06g0955 114 Pfam 60s Acidic ribosomal protein 19 113 - -
Lele06g0955 114 FunFam 60S acidic ribosomal protein P2 1 59 - -
Lele06g0955 114 CDD Ribosomal_P2 1 114 IPR044076 GO:0002182|GO:0003735|GO:0022625
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0955 Lele-ChrLele06 5885458 5886539 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0955 1 114 Cytoplasmic Ribosomal Protein Gene Family AT3G44590 64.035 4.02e-32 107
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1090 05 6784087 6785238 Lele06g0955 06 5885458 5886539 ECH
Lele06g0955 06 5885458 5886539 Lele06g0955 06 5885458 5886539 ECH
Lele06g0955 06 5885458 5886539 Lele07g1131 07 6821193 6822351 hybridization
Lele06g0955 06 5885458 5886539 Lele08g0942 08 5933430 5934579 hybridization