Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0948 ATGGCGAGTGGGCTCACGGGCACTAATTCCAACGGGGTTTTGGGCCCTCGCGCCAATCCTGAGAAGCTCATTATCGATACTGACCCTGGGATCGATGATAGCATGGCAATCATGATGGCGTTTCAAACACCTGGGGTGGAGGTCCTGGGCTTGACAACCGTATTTGGTAATGTTTCTACAGAAGATGCCACTCGCAATTCATTGCTTTTGATTGCTGGCTGTCAAAATGTTCCTGTGGCGGAGGGCAACCCGGAACCCTTGAAGGGTGGAATTCCACGAGTTGCTGACTTTATTCATGGTTCTGATGGGCTTGGAAACATATCCCTTCCCCCACCAAAAGCTAAAAAAATAGATAAAAGTGCTTCGGAGTTTTTGGTGGAGAAGGTTTCTGAATACCCTGGTGAAGTATCTGTGTTAGCACTTGGACCACTGACAAATTTAGCTTTGGCCATCAGAAGAGATTCCTGTTTTGCTAGCAAGGTGAAGAGAGTGGTTATACTCGGTGGTTCTTTCTTTGCCTTGGGGAATGTAAATCCAGCAGCAGAAGCAAATATCTACGGAGATCCAGAAGCAGCAGATATTGTGTTTACTTCTGGCGCAAATATTGTTGTTGTTGGAATAAATATTACAACCCAAGTGAAATTTACAGGTACTGAAAAATGTCTTTTGGTTTCAGATCATGACCTCCTTCAATTGAAAAATTCTGGAGGAAAGCATGCACGGCTCTTAAGTGAGATGTGCAAATTTTACCGGGATTGGCACGTTAAATCTGATGGTGTCTATGGAATTTTCCTTCACGACCCTGTCAGTTTCGTAGCACTTGTTCGTCCAGATCTTTTTACATACAAGAGAGGGGTAGTGAGGGTAGAGACACAAGGCCTCTGTGTCGGGCACACACTAATGGACCAAGGGTTAAAAAAATGGAATTCGAGCAATCCATGGACGGGTTTTTCCCCTGTTTCAGTTGCTTGGACGGTGGATGTTGATGGGGTCGTTAAGTTTATCAAGGAGACATTAATGAAGCCCTGA 1029 0.45 MASGLTGTNSNGVLGPRANPEKLIIDTDPGIDDSMAIMMAFQTPGVEVLGLTTVFGNVSTEDATRNSLLLIAGCQNVPVAEGNPEPLKGGIPRVADFIHGSDGLGNISLPPPKAKKIDKSASEFLVEKVSEYPGEVSVLALGPLTNLALAIRRDSCFASKVKRVVILGGSFFALGNVNPAAEANIYGDPEAADIVFTSGANIVVVGINITTQVKFTGTEKCLLVSDHDLLQLKNSGGKHARLLSEMCKFYRDWHVKSDGVYGIFLHDPVSFVALVRPDLFTYKRGVVRVETQGLCVGHTLMDQGLKKWNSSNPWTGFSPVSVAWTVDVDGVVKFIKETLMKP 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0948 342 Pfam Inosine-uridine preferring nucleoside hydrolase 23 332 IPR001910 GO:0016799
Lele06g0948 342 PANTHER INOSINE-URIDINE PREFERRING NUCLEOSIDE HYDROLASE 21 341 IPR023186 -
Lele06g0948 342 CDD nuc_hydro_CaPnhB 22 339 - -
Lele06g0948 342 Gene3D - 14 342 IPR036452 GO:0016799
Lele06g0948 342 MobiDBLite consensus disorder prediction 1 21 - -
Lele06g0948 342 SUPERFAMILY Nucleoside hydrolase 20 339 IPR036452 GO:0016799
Lele06g0948 342 MobiDBLite consensus disorder prediction 1 15 - -
Lele06g0948 342 FunFam Probable uridine nucleosidase 1 16 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0948 Lele-ChrLele06 5831933 5835405 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0948 06 5831933 5835405 Lele13g1670 13 25410177 25410605 CCT
Lele06g0948 06 5831933 5835405 Lele14g1614 14 23806368 23807882 CCT
Lele06g0948 06 5831933 5835405 Lele15g0745 15 4305374 4305886 CCT
Lele06g0948 06 5831933 5835405 Lele16g0751 16 4250515 4250943 CCT
Lele06g0948 06 5831933 5835405 Lele07g1121 07 6764995 6768392 hybridization
Lele06g0948 06 5831933 5835405 Lele08g0936 08 5879285 5882423 hybridization