Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0945 ATGGCAGAAGAGCAACGATGCCAAACAACCGAAGGCTACCGGCTCTGCGCCAACAACTGCGGCTTCTTCGGAAGTCCGGCCACCATGAATCTCTGTTCCAAATGCTACAGAGATTTCTGTCTCAAGGAACAACAAGAAGCCGCAACGAAATTAACCATAGAAACCGCTCTCTCCTCGGCATCTGCCCCTGCGCCTTCGCTGGCCACGGAGCCCCTCCATTCTCTGGAGGCGTCGAAAGCCCCGGATGTTACGATGGACGCGTCGATCTCAGCGCCGGCGGTCGCCATACCAGATGGGACGGCGGCGCAACCAAACCGATGTGCGACGTGTCGTAAAAGGGTCGGGTTTACCGGGTTCAAGTGCAAGTGCGGGATCACGTTTTGTGGCGTCCACAGGTACCCGGAGAAACACGGGTGTAGCTTTGATTTCAAGGGGGTGGGGCGAGAGGAAATAAGTCGAGCGAATCCTGTGGTCATAGCGGAGAAGCTCCATAAGATTTAA 501 0.5589 MAEEQRCQTTEGYRLCANNCGFFGSPATMNLCSKCYRDFCLKEQQEAATKLTIETALSSASAPAPSLATEPLHSLEASKAPDVTMDASISAPAVAIPDGTAAQPNRCATCRKRVGFTGFKCKCGITFCGVHRYPEKHGCSFDFKGVGREEISRANPVVIAEKLHKI 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0945 166 Pfam A20-like zinc finger 14 37 IPR002653 GO:0003677|GO:0008270
Lele06g0945 166 SMART A20_3 13 37 IPR002653 GO:0003677|GO:0008270
Lele06g0945 166 SMART AN1_Zf_4 107 144 IPR000058 GO:0008270
Lele06g0945 166 Pfam AN1-like Zinc finger 107 143 IPR000058 GO:0008270
Lele06g0945 166 FunFam Zinc finger AN1-type containing 6 83 162 - -
Lele06g0945 166 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 15 58 - -
Lele06g0945 166 ProSiteProfiles Zinc finger AN1-type profile. 101 147 IPR000058 GO:0008270
Lele06g0945 166 Gene3D - 1 65 - -
Lele06g0945 166 Gene3D - 84 161 IPR035896 -
Lele06g0945 166 ProSiteProfiles Zinc finger A20-type profile. 10 44 IPR002653 GO:0003677|GO:0008270
Lele06g0945 166 PANTHER AN1-TYPE ZINC FINGER PROTEIN 14 166 - -
Lele06g0945 166 SUPERFAMILY AN1-like Zinc finger 101 161 IPR035896 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0945 Lele-ChrLele06 5819763 5820263 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0945 1 166 C2H2 Transcription Factor Family AT3G52800 54.118 1.15e-55 171
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0945 06 5819763 5820263 Lele06g0945 06 5819763 5820263 ECH
Lele06g0945 06 5819763 5820263 Lele07g1120 07 6758420 6759852 hybridization
Lele06g0945 06 5819763 5820263 Lele08g0933 08 5864643 5865146 hybridization