Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0940 ATGGCGAAAGATTTCACGGTGCCGCCAGTGGTTTTTCCATCCGGTGGTAACCCCACCACCGGTGGATCAAACATCGCGCAGAGGCGAGTTCCTACTGCACCGTTTCAACCGCCTCGACCATCCAATTCCGGCATTCCCTTCATGTCCTTTGACATGGGGTCTGCAGCCGCAACTGCCCCCTCCGGCACAATTTACGGAGGCCCCCTCGGAGGCGGTAGCTCTGCGAACTTCGATGACGAGGAATCTCTGCTTGATGAGCTTGGGATCCACCCGGATCAAATCTGGAAGAAAATAAGATCGATACTCAATCCATACCGGGTAAATTACGTCGTGCACAAGGACTCTGATTTATCGGGGCCGATTCTTCTCTACATGTCCTTTTGCCTTTTCCAGCTACTTGCCGGAAAAATTCAATTCGGTGTGATCTTGGGCTGGATCGTGGTATCGTCTATCTTCTTATATGTGGTATTCAACATGTTGGCTGGTCGAACTGGCAATTTAGATCTGCATACTTGTACGAGTGTGGTTGGGTACTGTATGTTGCCCGTAGTGATTTTATCTGCTCTGACTCTTTTCTTGCCGCAACTTGGGATCGTGAGGTTTGTGGTTGCTGTGGTATTTGTGCTGTGGGCAACAAGGTCTTCCACTGGTCTTATAGTTTCGCTTGCGGATGGTGGGGATGAACATCGTGGGTTGATAGCATATGCCTGTTTCTTGATTTACACCCTATTTTCATGGCTTGTCATATTCTAG 753 0.4927 MAKDFTVPPVVFPSGGNPTTGGSNIAQRRVPTAPFQPPRPSNSGIPFMSFDMGSAAATAPSGTIYGGPLGGGSSANFDDEESLLDELGIHPDQIWKKIRSILNPYRVNYVVHKDSDLSGPILLYMSFCLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRTGNLDLHTCTSVVGYCMLPVVILSALTLFLPQLGIVRFVVAVVFVLWATRSSTGLIVSLADGGDEHRGLIAYACFLIYTLFSWLVIF 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0940 250 PANTHER GOLGI MEMBRANE PROTEIN YIP1 73 250 IPR045231 GO:0006888
Lele06g0940 250 Pfam Yip1 domain 129 247 IPR006977 GO:0016020
Lele06g0940 250 MobiDBLite consensus disorder prediction 16 30 - -
Lele06g0940 250 MobiDBLite consensus disorder prediction 1 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0940 Lele-ChrLele06 5791895 5792647 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0940 06 5791895 5792647 Lele13g1665 13 25389421 25391393 CCT
Lele06g0940 06 5791895 5792647 Lele14g1608 14 23782286 23785547 CCT
Lele06g0940 06 5791895 5792647 Lele15g0750 15 4331343 4333328 CCT
Lele06g0940 06 5791895 5792647 Lele16g0757 16 4270210 4272133 CCT
Lele05g1080 05 6688199 6692552 Lele06g0940 06 5791895 5792647 ECH
Lele06g0940 06 5791895 5792647 Lele06g0940 06 5791895 5792647 ECH
Lele06g0940 06 5791895 5792647 Lele08g0927 08 5834064 5834816 hybridization