Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0924 ATGTGGTTTTGCCGTTATATTCTAGGACCTTCAATTCCATTTCCCTGGACCTTTTCATTTCTTTACAGCTTTAGTTTCTTCGCAATTAAAGGAGTGCATCCCCTAAATATGGATACTTCAAATCCTGCAGTCTTTGTCAATGGAGAGCTGCTACAGTTATATGTTGGACGGAGGGTAAGGGCTGTTGTGCAAGTTTTTCGATCTGATGCTGGAGGTATAATTGGAAAATTAACTGATGAGAAGCAGATAGTTGTAAAGGGCTTGCCCCCGGGTGCTCTTGCGAATTTTGTTGAAGTTATTGGCATAGCTGACAGTGATAGATCCATTCGTGCTGAGATATGGACCAACTTTGGTGATTCAATTGATACCTTTAGTTACAATAAGCTTTGTCTTCTTGCAAATGGAGAATTCAAGCACTTGTTCCTGTGA 429 0.4056 MWFCRYILGPSIPFPWTFSFLYSFSFFAIKGVHPLNMDTSNPAVFVNGELLQLYVGRRVRAVVQVFRSDAGGIIGKLTDEKQIVVKGLPPGALANFVEVIGIADSDRSIRAEIWTNFGDSIDTFSYNKLCLLANGEFKHLFL 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0924 142 Gene3D - 37 142 IPR012340 -
Lele06g0924 142 CDD RPA3 42 141 - -
Lele06g0924 142 PANTHER REPLICATION PROTEIN A 14 KDA SUBUNIT A-RELATED 35 142 - -
Lele06g0924 142 Pfam Replication factor A protein 3 37 138 IPR013970 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Lele06g0924 142 SUPERFAMILY Nucleic acid-binding proteins 42 141 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0924 Lele-ChrLele06 5731778 5733890 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0924 37 142 Core DNA Replication Machinery Family AT4G18590 65.094 1.17e-49 152
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0924 06 5731778 5733890 Lele06g0924 06 5731778 5733890 ECH
Lele06g0924 06 5731778 5733890 Lele08g0913 08 5765158 5769755 hybridization