Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0908 ATGGCACCTGGATATCGGTTCTACCCAACTGAAGAGGAACTCATTTCCTTCTATTTGCACAGAAAGCTTGAAGGAGATCAGAGGGAAGACATCAACCGGGTTATACCTGTGCTTGATATTTATGAATATAATCCCTGGGATCTCCCACAGGTGTCGGGAGAGGCGAGTCTGGGAGACACGGAGCAGTGGTTCTTTTTCATTCCGAGACAAGAAAGCGAAGCTCGTGGAGGAAGACCAAGACGACTCACAACAACAGGCTACTGGAAAGCCACTGGCTCTCCGAACCATGTCTATTCCTCTGATAATCGCATCATCGGCATGAAAAGAACCATGGTTTTCTACAACGGAAGAGCCCCCAACGGCCACAAAACCGATTGGAAGATGAACGAGTACAAGGCCATCGTCGGAGCTCAACCGTCCTCAACTCGCCCAACAGATCCTCTGTTAAGGCAGGAATTCAGTTTATGCAGGGTGTACAAGAAATCAAAGTGCCTGCGAGCGTTTGACAGAAGGCCCCCTCCAAGGAGAGAGACGGATGCTTATGGGGGTTCAAGCTCAATGTCGTCGTCTCATCAACAAGTTCAAAACGCAGCGTCGACTTCATCAAAGCGATCTATAGGAATAGCAAGCTCACCAGAGAGTTCATCATCAGGAGAGCATGGACAAGCTTCGCAGAGTGGGAAAGGGTCGGGTCAAATGTATTTGGACGATGAGCCGTTGTTGGATTGGGAGCAAGTTGACTGGTTTCTTAGCAAGCATGACTCGACCGGGTGA 774 0.4935 MAPGYRFYPTEEELISFYLHRKLEGDQREDINRVIPVLDIYEYNPWDLPQVSGEASLGDTEQWFFFIPRQESEARGGRPRRLTTTGYWKATGSPNHVYSSDNRIIGMKRTMVFYNGRAPNGHKTDWKMNEYKAIVGAQPSSTRPTDPLLRQEFSLCRVYKKSKCLRAFDRRPPPRRETDAYGGSSSMSSSHQQVQNAASTSSKRSIGIASSPESSSSGEHGQASQSGKGSGQMYLDDEPLLDWEQVDWFLSKHDSTG 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0908 257 MobiDBLite consensus disorder prediction 167 236 - -
Lele06g0908 257 Pfam No apical meristem (NAM) protein 3 132 IPR003441 GO:0003677|GO:0006355
Lele06g0908 257 ProSiteProfiles NAC domain profile. 1 161 IPR003441 GO:0003677|GO:0006355
Lele06g0908 257 Gene3D NAC domain 10 165 IPR036093 GO:0003677|GO:0006355
Lele06g0908 257 MobiDBLite consensus disorder prediction 181 231 - -
Lele06g0908 257 SUPERFAMILY NAC domain 2 161 IPR036093 GO:0003677|GO:0006355
Lele06g0908 257 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 1 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0908 Lele-ChrLele06 5649323 5650784 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0908 4 248 NAC Transcription Factor Family AT5G22380 51.210 5.56e-78 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele06g0908 NAM 1e-31 No_clan