Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0905 ATGGTGGCAGCGGCGCCGAGAGCGGCAGTTATGGCACCTAACCTGAGAATGAAGTCCATTATGGCCAACCCTTTCTTACTTCCTACTGGTCTTGCGACTGCAGCTGCAACTCCTTTTCCTTTCTCCACGTTGCTCGACTCAGGGACATCGACGGGGCGAGGGACTCCTTTTCGCGGCCGTGGCAAGCTCACCGGAGTCTCTTCCGTCTCAGCAAAATGTGGGCAAGAGCAGAAGGTGGTACTCCGGAGCTATACTACAAGCATGCCCCCAGATCCTGCAGAAACTTCATTGAACTCTCTCGCAGAGGCTATTACGATAATGTTAAATTCCACAGAATCATCAAGTCCAAAATTTGAAGATGAGATAAGACAGGAGTTGAAGCACACCGGAGCTGGTATCTTATCCATGGCAAACGCCTGCCCAAATACTAATGGTAGTCAGTTCTTCATTACTTTGGCGCCATGCCCATCTTTGGATGATACTAAGGACATCGGTCAAGGATTGACAGAAGTTCCCTTCCCTGATATCCGAGAAATGTTGCTCCTGCAGTATTATGTGGAAACCGGGCATTTAATTGCTGCAGACCTCTAG 591 0.4941 MVAAAPRAAVMAPNLRMKSIMANPFLLPTGLATAAATPFPFSTLLDSGTSTGRGTPFRGRGKLTGVSSVSAKCGQEQKVVLRSYTTSMPPDPAETSLNSLAEAITIMLNSTESSSPKFEDEIRQELKHTGAGILSMANACPNTNGSQFFITLAPCPSLDDTKDIGQGLTEVPFPDIREMLLLQYYVETGHLIAADL 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0905 196 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 147 159 IPR002130 GO:0000413|GO:0003755
Lele06g0905 196 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 132 147 IPR002130 GO:0000413|GO:0003755
Lele06g0905 196 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 115 196 IPR002130 GO:0000413|GO:0003755
Lele06g0905 196 SUPERFAMILY Cyclophilin-like 114 160 IPR029000 -
Lele06g0905 196 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED 116 162 IPR044666 -
Lele06g0905 196 Gene3D - 91 172 IPR029000 -
Lele06g0905 196 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 114 160 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0905 Lele-ChrLele06 5625075 5630841 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0905 118 150 U-box Gene Family AT5G67530 57.576 1.12e-06 46.2