Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0896 ATGGGAAGAGTCCGCACTAAAACCGTGAAGAAATCTTCGCGCCAAGTGATCGAGAAGTATTACTCTCGAATGACCCTCGATTTTCACACAAACAAGAAAATCCTGGAGGAGGTGGCTCTCATTCCCTCCAAGAGGCTCCGCAATAAGATTGCGGGATTCTCCACTCACCTGATGAAGAGGATCCAGAAGGGTCCCGTTCGGGGTATCTCCCTCAAGCTTCAAGAGGAGGAGCGCGAGCGCAGAATGGATTTCGTGCCCGATGTTTCTGCGATTAAGACGGACCAGATTGAGGTCGATAAGGAGACTCTAGATATGCTCAGCGCTCTTGGCATGAGCGAGATTCCAGGGCTTGTTCAAGTTGATCCTGTTCCCGTTCAGCAATCCTTTGGATTTGGCCGCGGTGGTTTTGGTGGGGCCGGCAGGAGGTTCTGA 432 0.5185 MGRVRTKTVKKSSRQVIEKYYSRMTLDFHTNKKILEEVALIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTDQIEVDKETLDMLSALGMSEIPGLVQVDPVPVQQSFGFGRGGFGGAGRRF 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0896 143 FunFam 40S ribosomal protein S17 1 62 - -
Lele06g0896 143 SUPERFAMILY Rps17e-like 1 62 IPR036401 GO:0003735|GO:0005840|GO:0006412
Lele06g0896 143 ProSitePatterns Ribosomal protein S17e signature. 41 56 IPR018273 GO:0003735|GO:0005840|GO:0006412
Lele06g0896 143 Pfam Ribosomal S17 1 120 IPR001210 GO:0003735|GO:0005840|GO:0006412
Lele06g0896 143 Hamap 30S ribosomal protein S17e [rps17e]. 1 63 IPR001210 GO:0003735|GO:0005840|GO:0006412
Lele06g0896 143 Gene3D - 1 62 IPR036401 GO:0003735|GO:0005840|GO:0006412
Lele06g0896 143 PANTHER 40S RIBOSOMAL PROTEIN S17 1 127 IPR001210 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0896 Lele-ChrLele06 5572653 5573084 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0896 1 143 Cytoplasmic Ribosomal Protein Gene Family AT5G04800 80.556 1.83e-78 227