Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0893 ATGAAGCTACCGCTTATTGTCAAGAATAAGCCAGAAATGAGGTCATCTTCTTCTTCCTGGCCGTGGCCGTCTTGTCACCAACCCAGAACCCTCTCTTTCAGAGCCAACACCACCGACTCGGATTCTCCAGAAGTAGTGGAAGTCGACCCCATAGAGTCATTGGTTCGCGGGTTGCGGTCGGACCGGAGGAGGTTGTTCTTCGAGCCAGATGACACTAGCTCGATATTAGAGACGAAAGCTTCTTCTGCAGAAGGAGGACGCGTGCCATTCAAAGACAGCTTCGTGTTATCCATGGAGTCTCGAGACCCTTACGAAGACTTTCGAAAGTCCATGGAGGAGATGGTGGAGGCTCACGCCCTTAAGCACTTGGAGGCTCTGCAGGAGCTTCTTTGTTGGTATTTGAGGGTCAATGCCAAAAGCAATCATGTCTCTATTCTCGCTGCTTTTGTAGATTTATTGGTTGGCCTTTCTCCTTCTCCTTGCCCTTCTTCTTCTTCTTCTTCTCATTTATCTTTCTCTACTTCGTCTCTGTCTTCTTCCTTTAGTACACGCTGTGTTCATGATTCTTCTTTGGAAGCCGAGGAAGAGGTTGATGCAATTAATCAGGCTTCAACTTCGGCTTCGTCATTGTCACAACAAGTTAAGGAGGGGGATATTGAACCTCATGGCGACGAGGCTTCTTCTTTGAATGCTTGA 696 0.4784 MKLPLIVKNKPEMRSSSSSWPWPSCHQPRTLSFRANTTDSDSPEVVEVDPIESLVRGLRSDRRRLFFEPDDTSSILETKASSAEGGRVPFKDSFVLSMESRDPYEDFRKSMEEMVEAHALKHLEALQELLCWYLRVNAKSNHVSILAAFVDLLVGLSPSPCPSSSSSSHLSFSTSSLSSSFSTRCVHDSSLEAEEEVDAINQASTSASSLSQQVKEGDIEPHGDEASSLNA 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0893 231 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 96 157 IPR006458 -
Lele06g0893 231 ProSiteProfiles OVATE domain profile. 96 155 IPR006458 -
Lele06g0893 231 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 45 157 IPR038933 GO:0045892
Lele06g0893 231 MobiDBLite consensus disorder prediction 199 215 - -
Lele06g0893 231 Pfam Transcriptional repressor, ovate 100 156 IPR006458 -
Lele06g0893 231 MobiDBLite consensus disorder prediction 196 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0893 Lele-ChrLele06 5553768 5554463 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Lele06g0893 Ovate 4.6e-22 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele14g1552 14 23498796 23499443 Lele06g0893 06 5553768 5554463 CCT
Lele15g0797 15 4604163 4604798 Lele06g0893 06 5553768 5554463 CCT
Lele16g0815 16 4564783 4565430 Lele06g0893 06 5553768 5554463 CCT
Lele06g0893 06 5553768 5554463 Lele06g0893 06 5553768 5554463 ECH
Lele06g0893 06 5553768 5554463 Lele07g1070 07 6455141 6455827 hybridization
Lele06g0893 06 5553768 5554463 Lele08g0882 08 5571633 5572331 hybridization