Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0884 ATGCCTGCAAAACAGTCCCAACTGAACGGGTCCTACTATGGCCCATCCATCCCGCCACCCACCTCCTACCACCGACCAGGCCGCGGCACCGGCGGCTGCTGCGGACTCTTCTCCTGTCTCTTCAATCTTCTTATTACCATCATCGTCATCGTCGGCGTCGCTGTTTTCTTGTTCTGGCTCATCGTTCGTCCCAACGTCGTCAAATTCCACGTCACCGATGCCTCCCTCACTCAATTCAACTTCACCTCTAACAACACCCTCTTTTACAACCTGGCCCTCAACATCACCGTCCGAAACCCCAACCGCAAGCTAGGGCTCTACTACGACAAAATCGAAGCCTCTGCATCGTACCAGGATGCCTGGTTCGATTCTCAGACTCTGACGCCCTTCTATCAGGGCCACAAGACTACAGAATTTTTGAACCCTGTCTTCGTGGGTCAACGCTCCTTGCTCCTTGACTCCACCCAGACTTCGGAGTTGAACAAGGACATGAGCTCTGGGATTTATAATATCATCGTGACTCTGCGTCTCAAGATAAGGTTCAAGATAGGAGCCTTGAAGACGTTCAGGTTGAAGCCCAGGGTTAAATGTGACTTGTCAGTTCCTCTCACTCTCACCGGTGCACCTGATGGAAATTCACCCGCCGGTGAGTTTCAGACCAAGCGGTGTGACCTCGATTACTGA 684 0.5234 MPAKQSQLNGSYYGPSIPPPTSYHRPGRGTGGCCGLFSCLFNLLITIIVIVGVAVFLFWLIVRPNVVKFHVTDASLTQFNFTSNNTLFYNLALNITVRNPNRKLGLYYDKIEASASYQDAWFDSQTLTPFYQGHKTTEFLNPVFVGQRSLLLDSTQTSELNKDMSSGIYNIIVTLRLKIRFKIGALKTFRLKPRVKCDLSVPLTLTGAPDGNSPAGEFQTKRCDLDY 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0884 227 Pfam Late embryogenesis abundant protein 94 197 IPR004864 -
Lele06g0884 227 PANTHER OS05G0367900 PROTEIN 38 206 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0884 Lele-ChrLele06 5494270 5494953 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0884 61 216 SNARE and Associated Proteins AT1G32270 37.821 1.28e-29 111
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0884 06 5494270 5494953 Lele13g1615 13 25101089 25101718 CCT
Lele06g0884 06 5494270 5494953 Lele14g1549 14 23488929 23489558 CCT
Lele06g0884 06 5494270 5494953 Lele15g0800 15 4614687 4615316 CCT
Lele06g0884 06 5494270 5494953 Lele16g0818 16 4575120 4575749 CCT
Lele06g0884 06 5494270 5494953 Lele06g0884 06 5494270 5494953 ECH
Lele06g0884 06 5494270 5494953 Lele07g1061 07 6401452 6402135 hybridization
Lele06g0884 06 5494270 5494953 Lele08g0872 08 5508661 5509344 hybridization