Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0873 ATGAACCGCGTAGCTCCCTCCATGGATGAGCGTTTCCTGAAGATTGTTTCAGCACTCATTCTCTCGCTTGCTGTAATGGGTTTTAGTGCCACTGATCCGAATGACGTGAAGATTCTCAACCAATTCAGGAAAGGCGTGGACAACCCGGAGCTTCTGCCGTGGCCTGAAGACGGTGGAGACCCATGCGGGAGCCCTCCTTGGAAGTACATCTTCTGCAAGGGAAATAGAGTTTCCCAGATTCAGGCTAAGAACTTGAACCTGAGTGGTCCTCTGCCTCAGAATTTTAACCAGCTCTCCATGCTAGAAAACATTGGTCTTCAGAACAACAAGCTCAACGGGCCGTTACCGTCTTTCAGTGGGTTATCCAATCTGAGATATGCATACTTGGACTACAATGACTTCGATTCCATTCCCGCTGATTTCTTTGACGGGCTCGTGAGTCTAGAAGCTCTGGCATTGGATGATAATAATTTTAATGCCAGCACTGGATGGCAATTCCCCCCGCAGTTGCAAGATTCATCACAGTTAACCAATATTTCCTGTATGAGCTGCAACTTAGCCGGTCCATTGCCGAGTTTTCTGGGGAATTTGTCTTCTTTGTCTATCCTGAAACTTTCACGCAACAATTTAACTGGTGAAATTCCGGCGACTTTAAGTGGCTCGATTTTGCAGGTTCTATGGTTGAACGATCAGCAGGATGGCGGTCTCACTGGTTCTATTGATGTGGTGGCAACCATGACTTCGCTTACGAGTGTGTGGCTTCATGGAAATCACTTCACGGGGACGATTCCTAAGAACATTGGGGATTTAAGTTCTCTCAAGGATCTCGATCTCAATTATAACCAGTTCGTTGGCCTAATCCCTGATGCTTTGGGTAAAATGAAACTCGACAGTCTTAATTTGAACAACAACCACCTAATGGGACCGATCCCAAATTTCGCAGCAGGCAAAGTTTCATACGATTATAATCGTTTTTGTCAACCCAAAGGCGTTCCTTGTGCCCTTGAAGTCATGGCACTTCTGGACTTTCTGGATGGGTTGAATTATCCTTTAAATCTAGTTGAATCTTGGTCTGGTAATGACCCATGTAAAGGTCCATGGCTGGGACTAAAATGCGATGACTCTGGAAAGGTGTCAATGATTAATTTGCCCAAATTTAAACTCAATGGTACTCTGAGTCCCTCACTTGCAAACTTAGGTTCTCTTGTTGAGATCAGACTGGGGGGCAACAATCTGAGTGGCCAAATACCTAGTAATTGGACTAGCTTGAGTTCTCTGACACTGTTGGATCTCAGTAACAATAACATTTCTCCTCCACTGCCTCATTTTAGCAGCAAGTTGAAACTTGTCGATACTGGGAACTCTTTATTGAATGGGAACCCAGAGGCCCCATCATCTGGGAACAGCTCATCTTCTGGGAATTCCATTCCTTCAATTGATACTCCATCCCCATCAACACGCACAAATCCCAGTCCCAATACTGCTCTTGGATCACAAACTTCCAACAGGAAAATTTTGGTGGCAATCGTAGCCCCTGTTGCAGGTATTGCGGCGGCAGCTTTTCTACTCATTCCCCTGATATATTGTTACAAGAGGAGAAAAGATAGCTCACTGGCTCCAAGTTCACTAGTAATCCACCCTAGAGATCCATCTGATTCAAACAATATGGTAAAGATTGCTGTAGCTAGCAATACCTACGGAAGTACGTCCACATTAACAGGGAGTGGGTCAGCAAGTAGAAACAGCAGTGGAACTGGGGAGTCTCATGTCATTGAAGCTGGAAATCTTGTGATATCAGTTCAAGTTCTTCGAAATGTGACTAAGAATTTTGCCCCAGAGAATGAGCTTGGTCGTGGTGGATTTGGTGTCGTATATAAGGGAGAGTTGGATGATGGGACTAAAATAGCAGTAAAAAGAATGGAAGCTGGTATAATTAGTAACAAAGCGTTGGATGAATTTCAGTCTGAAATTGCAGTTCTTTCAAAAGTGAGACACCGTCATCTAGTGTCTCTCCTGGGTTACTCTGTTGAAGGTAATGAGAGAATTCTAGTTTATGAGTATATGTCCCAAGGGGCTCTTAGCAAACATCTTTTTCAATGGAAGAGCCTTAAGTTGGAGCCACTTTCTTGGAAAAGGAGGCTCAATATCGCATTGGATGTTGCTAGAGGAATGGAGTATCTCCATAGTCTGGCTCATCAGAGCTTCATTCACAGAGATCTTAAGCCCTCCAATATTTTGCTTGGGGATGATTTTAGAGCCAAAGTCTCAGACTTTGGATTGGTTAGACTTGCTCCTGATGGTGAAAAATCTGTAGTAACTCAGCTTGCTGGGACCTTTGGCTACTTAGCCCCAGAATATGCAGTGACTGGAAAAATCACAACCAAAGCAGATGTCTTTAGTTTTGGAGTTGTGTTAATGGAGTTGTTGACTGGATTGATGGCACTTGATGAGGATAGACCTGAGGAAAGCCAATACTTGCCTGCATGGTTCTGGCATATAAAATCTGATAAGGAGAAACTTATGGCTGCTATTGATTCATCCTTTGACATCAAAGAAGAAACTTTTGAGAGTATTACTGTCATTGCTGAGTTAGCTGGTCACTGCACTGCAAGAGAACCAAGCCAACGACCAGATATGGGCCATGCTGTGAATGTTCTCGCTCCACTCGTTGAAAAATGGAAACCCTTTGATGATGACACTGAGGAGTATTCTGGAATTGATTATAGCCTTCCCCTTAATCAGATGGTGAAGGGTTGGCAAGAGGCAGAAGGAAAGGACTTGAGTTACATGGACCTGGAAGACACTAAGGGTAGTATCCCCGCAAGGCCAACTGGATTTGCAGATTCTTTTACTTCTGCTGATGGTCGCTAG 2871 0.4417 MNRVAPSMDERFLKIVSALILSLAVMGFSATDPNDVKILNQFRKGVDNPELLPWPEDGGDPCGSPPWKYIFCKGNRVSQIQAKNLNLSGPLPQNFNQLSMLENIGLQNNKLNGPLPSFSGLSNLRYAYLDYNDFDSIPADFFDGLVSLEALALDDNNFNASTGWQFPPQLQDSSQLTNISCMSCNLAGPLPSFLGNLSSLSILKLSRNNLTGEIPATLSGSILQVLWLNDQQDGGLTGSIDVVATMTSLTSVWLHGNHFTGTIPKNIGDLSSLKDLDLNYNQFVGLIPDALGKMKLDSLNLNNNHLMGPIPNFAAGKVSYDYNRFCQPKGVPCALEVMALLDFLDGLNYPLNLVESWSGNDPCKGPWLGLKCDDSGKVSMINLPKFKLNGTLSPSLANLGSLVEIRLGGNNLSGQIPSNWTSLSSLTLLDLSNNNISPPLPHFSSKLKLVDTGNSLLNGNPEAPSSGNSSSSGNSIPSIDTPSPSTRTNPSPNTALGSQTSNRKILVAIVAPVAGIAAAAFLLIPLIYCYKRRKDSSLAPSSLVIHPRDPSDSNNMVKIAVASNTYGSTSTLTGSGSASRNSSGTGESHVIEAGNLVISVQVLRNVTKNFAPENELGRGGFGVVYKGELDDGTKIAVKRMEAGIISNKALDEFQSEIAVLSKVRHRHLVSLLGYSVEGNERILVYEYMSQGALSKHLFQWKSLKLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKPSNILLGDDFRAKVSDFGLVRLAPDGEKSVVTQLAGTFGYLAPEYAVTGKITTKADVFSFGVVLMELLTGLMALDEDRPEESQYLPAWFWHIKSDKEKLMAAIDSSFDIKEETFESITVIAELAGHCTAREPSQRPDMGHAVNVLAPLVEKWKPFDDDTEEYSGIDYSLPLNQMVKGWQEAEGKDLSYMDLEDTKGSIPARPTGFADSFTSADGR 956
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0873 956 Gene3D Transferase(Phosphotransferase) domain 1 688 906 - -
Lele06g0873 956 Gene3D Phosphorylase Kinase; domain 1 572 687 - -
Lele06g0873 956 Pfam Leucine rich repeat 248 306 IPR001611 GO:0005515
Lele06g0873 956 Pfam Leucine rich repeat N-terminal domain 33 72 IPR013210 -
Lele06g0873 956 Pfam Leucine rich repeat N-terminal domain 337 373 IPR013210 -
Lele06g0873 956 FunFam Leucine-rich repeat receptor-like kinase 335 460 - -
Lele06g0873 956 CDD STKc_IRAK 616 889 - -
Lele06g0873 956 FunFam receptor protein kinase TMK1 572 687 - -
Lele06g0873 956 ProSitePatterns Protein kinases ATP-binding region signature. 616 638 IPR017441 GO:0005524
Lele06g0873 956 SUPERFAMILY L domain-like 64 449 - -
Lele06g0873 956 Pfam Protein tyrosine and serine/threonine kinase 613 884 IPR001245 GO:0004672|GO:0006468
Lele06g0873 956 ProSiteProfiles Protein kinase domain profile. 610 890 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele06g0873 956 PANTHER OSJNBA0070M12.3 PROTEIN 18 956 - -
Lele06g0873 956 SMART serkin_6 610 890 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele06g0873 956 Gene3D Ribonuclease Inhibitor 335 460 IPR032675 -
Lele06g0873 956 Gene3D Ribonuclease Inhibitor 32 331 IPR032675 -
Lele06g0873 956 SUPERFAMILY Protein kinase-like (PK-like) 585 886 IPR011009 -
Lele06g0873 956 MobiDBLite consensus disorder prediction 454 498 - -
Lele06g0873 956 SMART LRR_typ_2 121 144 IPR003591 -
Lele06g0873 956 SMART LRR_typ_2 145 168 IPR003591 -
Lele06g0873 956 SMART LRR_typ_2 270 293 IPR003591 -
Lele06g0873 956 SMART LRR_typ_2 399 422 IPR003591 -
Lele06g0873 956 SMART LRR_typ_2 197 221 IPR003591 -
Lele06g0873 956 SMART LRR_typ_2 423 447 IPR003591 -
Lele06g0873 956 SMART LRR_typ_2 246 269 IPR003591 -
Lele06g0873 956 ProSitePatterns Serine/Threonine protein kinases active-site signature. 735 747 IPR008271 GO:0004672|GO:0006468
Lele06g0873 956 FunFam receptor protein kinase TMK1 688 905 - -
Lele06g0873 956 FunFam Receptor-like kinase TMK4 33 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0873 Lele-ChrLele06 5450215 5453469 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0873 65 923 Receptor kinase-like Gene Family AT1G55610 30.472 5.98e-83 289
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Lele06g0873 PK_Tyr_Ser-Thr 1.4e-47 CL0016