Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0868 ATGCACCCCCATCACGATGTCTCTGCTCTGCATGGATTCGTGCCCCGCATGCAGTACAACCTCTGGAGCACGGTTAACACGAACGCGGCGGCGAGTGATATCCCACGCTCTCAACAGGGTCTGTCCCTCAGCCTTTCCTCTCAGCAGGCAGGGATGGGGTCTTTCCGGGTCGAGCGTGACGTACCATCACAGAGTCAGGCGCCAGCCATGTCAGGGGATGATATCCGTGCGTCAGGTGGGTCATCGTCCTCGGCGTCTGGAGTTACTAATGGTGTTTCAGGGATTCAGAGCGTGCTCCTGGGCTCTAAGTACTTGAAGGCAGCGCAGGAACTGCTAGACGAGGTCGTGAACGTGAACGATGGCATAAAGAGCGAAATGGCAAAGAAAAGTAGCAGCCAGACGAAGGCGATTAAAGAGTCTTCGACGGCAGTAAGTGGAGATGGCTCGCCTGCCGTAGATGGAAGCGCCAAGCCCGGCCCCGAGCTCTCAACTGCGGAGAAACAAGATATTCAGATGAAGAAGGCGAAGTTAATCACCATGCTTGACGAGGTGGAGCAGAGGTACAGACAATATCACCATCAGATGCAGATAGTGAGTTCTTCATTTGAACAAGCTGCAGGGATTGGGTCGGCGAGAACATACACAGCACTGGCACTACAAACAATCTCGAAGCAGTTTCGGTGTTTGAAAGATGCAATATTGGGCCAAATTCGAGCTGCCAACAAGAGCTTAGGGGAGGAAGATTGCTTTGGTACAAAAATGGAAGGTTCCAGGCTTAAATACGTGGACCATCATCTTCGCCAACAGCGAGCTCTCCAACAGTTGGGAATGATCCAGCACAATGCTTGGAGACCCCAGAGAGGATTGCCTGAAAGATCTGTTTCGGTTCTTCGCGCTTGGCTTTTCGAGCACTTCCTCCACCCTTACCCCAAGGACTCTGACAAACACATGCTTGCAAAACAAACAGGGCTCACCAGGAGCCAGGTCTCAAATTGGTTCATAAATGCGCGAGTCCGATTGTGGAAGCCGATGGTGGAAGAAATGTACAAGGAGGAGATGAAGGAGCACGAACAGAACGGTGGGGATGAGAGATCAAGCAAGAGTAGTGAAGATCCTGCCATGAAATCTGCAGCAGCCCCACAAGAGAAATCTCCTGCCTCTGCCCCTGAACCCAAAAGCTTCAATTTCAAACCAGACATTTCCACAAACCCCAACCCTCCAACAGTTTCTGTATCTACGCCATCAACATCACCAGTTGGAAGAAATGCCAGAAACCACCCAGGGTTCAGCTTCATGGGCACTTCAGAGCTAGATGGAATCGCACAACCGAGTCCCAAGAAACCAAGGAACCACGAGATTCTGCAGTCCACAATCAATGATGATATGAAGCCTGATGATGGAGGGAATGGTCAAATCTCCATGAAATTTAGCGATGAGAGGCAGAGCAGAGATGGGTACTCTTTCATGGGAAATCAGACGAACTTCATCGGGGGATTTGGGCAATACCCAATCGCAGAAATTGATAGGTTTGAAGCAGAGCAATTCACGCCAAGGTTCTCAGGTAATAATGGAGTTTCCCTCACTCTTGGTCTTCCCCACTGTGACTCATTATCAGCAGCAACACATCAAACATTTCTTCCAAACCAGAGCATTCAACTTGGGAGAAGGATGGAGCTGGGTGAACCAAACGAGTTTGGTGGTATAAACACTTCAACACCTCTCTCTTCAGCTGCATTTGAGAATATCAATATGCAGAACCCCAAGAAGTTTGCTGCACAATTGTTGCCAGACTTCGTGTCTTGA 1803 0.4986 MHPHHDVSALHGFVPRMQYNLWSTVNTNAAASDIPRSQQGLSLSLSSQQAGMGSFRVERDVPSQSQAPAMSGDDIRASGGSSSSASGVTNGVSGIQSVLLGSKYLKAAQELLDEVVNVNDGIKSEMAKKSSSQTKAIKESSTAVSGDGSPAVDGSAKPGPELSTAEKQDIQMKKAKLITMLDEVEQRYRQYHHQMQIVSSSFEQAAGIGSARTYTALALQTISKQFRCLKDAILGQIRAANKSLGEEDCFGTKMEGSRLKYVDHHLRQQRALQQLGMIQHNAWRPQRGLPERSVSVLRAWLFEHFLHPYPKDSDKHMLAKQTGLTRSQVSNWFINARVRLWKPMVEEMYKEEMKEHEQNGGDERSSKSSEDPAMKSAAAPQEKSPASAPEPKSFNFKPDISTNPNPPTVSVSTPSTSPVGRNARNHPGFSFMGTSELDGIAQPSPKKPRNHEILQSTINDDMKPDDGGNGQISMKFSDERQSRDGYSFMGNQTNFIGGFGQYPIAEIDRFEAEQFTPRFSGNNGVSLTLGLPHCDSLSAATHQTFLPNQSIQLGRRMELGEPNEFGGINTSTPLSSAAFENINMQNPKKFAAQLLPDFVS 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0868 600 Coils Coil 167 187 - -
Lele06g0868 600 SUPERFAMILY Homeodomain-like 284 350 IPR009057 -
Lele06g0868 600 MobiDBLite consensus disorder prediction 126 148 - -
Lele06g0868 600 MobiDBLite consensus disorder prediction 352 426 - -
Lele06g0868 600 SMART prehox3 93 235 IPR006563 -
Lele06g0868 600 SMART HOX_1 283 347 IPR001356 GO:0003677
Lele06g0868 600 MobiDBLite consensus disorder prediction 396 423 - -
Lele06g0868 600 Pfam Associated with HOX 98 233 IPR006563 -
Lele06g0868 600 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 56 369 - -
Lele06g0868 600 MobiDBLite consensus disorder prediction 126 168 - -
Lele06g0868 600 CDD homeodomain 283 344 IPR001356 GO:0003677
Lele06g0868 600 Pfam Homeobox KN domain 300 339 IPR008422 GO:0003677|GO:0006355
Lele06g0868 600 ProSiteProfiles 'Homeobox' domain profile. 280 343 IPR001356 GO:0003677
Lele06g0868 600 FunFam BEL1-like homeodomain protein 9 286 348 - -
Lele06g0868 600 MobiDBLite consensus disorder prediction 352 370 - -
Lele06g0868 600 Gene3D - 286 365 - -
Lele06g0868 600 MobiDBLite consensus disorder prediction 53 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0868 Lele-ChrLele06 5410602 5412679 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0868 6 600 Homeobox Transcription Factor Family AT2G35940 52.830 1.23e-172 504
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Lele06g0868 POX 9.2e-50 No_clan