Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0866 ATGTGCGATATCGCCTTTTCCACTCTTCTCCCATTATTGATATGTCTGACAAGCTATCGATCTTCTTCTACTCCTTCGACTACTTCATCCGACTTCAATCTTCTTTCCAGCCAGGGTTTTACCAGTGACATGGACGACAATATTGAAGTTCCTACCTTCTTCCTGTGCCCCATCTCCTTGGAAATCATGAAGGATCCCATCACCGTCTCCTCCGGGATTACCTACGACAGAGAGAGCATCGAGAAATGGCTCTTCTCCGGCAAAAACAAGACCTGCCCAGTCACCAAACTACCTCTCTCCGTATCTGACTCCTCCGACCTCCTTCCGAACCATACCCTTCGTCGTTTGATTCAATCCTGGTGTACCCTCAACGCCACTCACGGCATCCAAAGGATCCCCACGCCAAAACCACCCGTCACCAAAACCCAGGTTGCCAAAATCATCAAAGACGCTTCTCGATCTTCTCTTTCCCCAGCTAAATGCCTCCAAACACTCAAATCCATTGCTTCCGAAAGCGACGCCAATAAACGTAGCATAGAAGCCGCCGGCGCTGTGGAATTCTTGGCATCCATTGTACTCCGTCACACAAATTTCTCCTACACACCCGAAGAGGCCAGCCCTGATGATGATGGGTTTGAATTGAAAACCAGCGGAGGCGACGAAGCCTTAAGCATCCTCCATAGCCTCCACCTGTCCGAGGCCGGCTTCAAGAGTCTCGTAACCTTCGAAAACGGATCATTCATTGAATGCTTAACCAGAATCATGCAGAGGGGATTCTACGAGTCACGCGCTTATGCTGTCTTGTTGTTAAAATCCATGTTTGAAGTAGCTGATCCGACGGTTTTATCCCATTTGAAACCTGAAATATTCGTTGAATTAGTTCAACTGTTGAAAGACCAGATATCTCAGCAAGCCTCGAAGGCGACTCTAAGAACACTCATCCAAATATGTCCATGGGGGAGAAACAGAATAAGAGCAGTGGAATCCGGAGGCGTATCGGTGCTGATAGAGCTTCTTCTAGACTGTAAGGACAGGAAGCCATGTGAGATGATGATGGTGTTGTTGGAGATGCTATGTGGATGTGCCGAGGGGAGAGCTGAGTTACTGAGTCATGGAGCAGGAATCGCAATAGTTTCGAAGAAGATTCTAAGGGTGTCGACGATGGCCAACGATAGGGCAGCGAGGATTCTGCTGTCCATTGCCAAGTTCTCTGCAACTCCAAGCGTATTGCAGGAAATGCTGAATGTCGGGGTAGTGGCGAAGCTGTGTTTGGTTCTTCAAGTGGAGAGTGGGCGAAAGGCTCAGGAGAAAGCCAGAGAGATCCTCAGAATGCATTCTCGGGCTTGGAGGAATTCTCCATGCGTACCCAGCAATTTGCTTTCTTCTTACCCGAATTGA 1398 0.4857 MCDIAFSTLLPLLICLTSYRSSSTPSTTSSDFNLLSSQGFTSDMDDNIEVPTFFLCPISLEIMKDPITVSSGITYDRESIEKWLFSGKNKTCPVTKLPLSVSDSSDLLPNHTLRRLIQSWCTLNATHGIQRIPTPKPPVTKTQVAKIIKDASRSSLSPAKCLQTLKSIASESDANKRSIEAAGAVEFLASIVLRHTNFSYTPEEASPDDDGFELKTSGGDEALSILHSLHLSEAGFKSLVTFENGSFIECLTRIMQRGFYESRAYAVLLLKSMFEVADPTVLSHLKPEIFVELVQLLKDQISQQASKATLRTLIQICPWGRNRIRAVESGGVSVLIELLLDCKDRKPCEMMMVLLEMLCGCAEGRAELLSHGAGIAIVSKKILRVSTMANDRAARILLSIAKFSATPSVLQEMLNVGVVAKLCLVLQVESGRKAQEKAREILRMHSRAWRNSPCVPSNLLSSYPN 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0866 465 Pfam U-box domain 50 122 IPR003613 GO:0004842|GO:0016567
Lele06g0866 465 FunFam RING-type E3 ubiquitin transferase 44 130 - -
Lele06g0866 465 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 33 131 IPR013083 -
Lele06g0866 465 SUPERFAMILY RING/U-box 43 127 - -
Lele06g0866 465 CDD RING-Ubox_PUB 54 96 IPR045210 -
Lele06g0866 465 ProSiteProfiles U-box domain profile. 49 127 IPR003613 GO:0004842|GO:0016567
Lele06g0866 465 PANTHER WDSAM1 PROTEIN 47 456 IPR045185 GO:0061630
Lele06g0866 465 Gene3D - 142 453 IPR011989 -
Lele06g0866 465 SUPERFAMILY ARM repeat 161 452 IPR016024 -
Lele06g0866 465 SMART Ubox_2 53 120 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0866 Lele-ChrLele06 5389561 5391116 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0866 44 464 U-box Gene Family AT3G52450 56.164 2.90e-172 489