Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0865 ATGATGGAGAGAGGGTGGAAGCATAATACTGAGATATCACCTAATTGTCCCCGGTGTGGCTCTTGCAACACCAAGTTCTGCTATTACAATAACTACAGCTTAACTCAACCTCGCTACTTTTGCAAAGCCTGTAGAAGATACTGGACCAAAGGAGGATCCCTCCGCAACGTCCCTGTCGGCGGTGGCTGCCGGAAAACTAGGCGCCATACTACCAAGACTTTACGAGTACACTCGGCCTTGACTAATGCCCATCCCTCAACTGTTTCATCTTCAAACTCCTCATCACCGCAGGCGTCTGATCATGCTCCACATATTGATCTTGCCCTGATTTATGCCAATTTTCTCAATCAAAACCCAGGTTCAAGTGATCAGGAGTCACACCATCATCAATTCATGAAAACACTAGGTTTTGATCCTTGCATAGAGCATTCGAGTCTATCCGACATAGTTTTTGGTCTTTCTGAACCATCCACAATAATAGAGTCCCATTTCAATGTTGTTGGGGATCATCCTCATCTGGGTGGGTTATTCAACTCCATGCAAGAGCATAAGGAGGACAGAATAATTGGTACCAGCGATTTTGAGCTGCTACCATTACCAGGTGAGGAGGTAGCGTCGCAATATGGTATGATGATATGGTCCTCCGAAGAATCTCATCATGATGAGATGATTGTCGTAAACCAGGCGCCACCTGGAATTCAACCTCATCGTGTCAATGGTAATTGGGGACCCTTCCTTTACTCGACCGATGTTTCTTTTCCCGGCCTTTGA 771 0.4591 MMERGWKHNTEISPNCPRCGSCNTKFCYYNNYSLTQPRYFCKACRRYWTKGGSLRNVPVGGGCRKTRRHTTKTLRVHSALTNAHPSTVSSSNSSSPQASDHAPHIDLALIYANFLNQNPGSSDQESHHHQFMKTLGFDPCIEHSSLSDIVFGLSEPSTIIESHFNVVGDHPHLGGLFNSMQEHKEDRIIGTSDFELLPLPGEEVASQYGMMIWSSEESHHDEMIVVNQAPPGIQPHRVNGNWGPFLYSTDVSFPGL 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0865 256 MobiDBLite consensus disorder prediction 79 100 - -
Lele06g0865 256 ProSiteProfiles Zinc finger Dof-type profile. 14 68 IPR003851 GO:0003677|GO:0006355
Lele06g0865 256 ProSitePatterns Zinc finger Dof-type signature. 16 52 IPR003851 GO:0003677|GO:0006355
Lele06g0865 256 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 11 141 IPR045174 GO:0003700|GO:0006355
Lele06g0865 256 Pfam Dof domain, zinc finger 15 68 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0865 Lele-ChrLele06 5383561 5384331 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0865 9 250 C2C2-Dof Transcription Factor Family AT3G52440 38.911 4.83e-44 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lele06g0865 zf-Dof 1.5e-30 No_clan