Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0857 ATGGCCATGCAAACTGTTTATTTCAAAGAAGCTGACGGAGCTACTCATCGTTCCGCTGGGCATATGTCATCTGTAACTTCGGCTCCTTGGTGGAGCGCGTTAGGGTCCCAAACAATTTTTGGTGAATCTTGTGGACAAATGAAACATTTTTCACTGGAGATTCCCAACTATGTAGATCAACTTGCTGCCAATAAGCAAGCAGGAAGAGGAGCTGAACAAGTGTGCACTCAGTTCGCTATCTTTTCGGATGATTGTAAAATGTCAGGTGATCAGAAGTCTCAAACTGGCTTATCACTTCAGTCATCGATTCCTGATCCTCACACTCGTGTTGAGCTGGGAATTAATCAGCCCGTGATCTGCGCAAAATATCCTTATATGGATCAATTTTATGGGCTCTTCTCAACTTATGGACCTCAAGTTCCGGGCCGTATGATGCTGCCACTTAACATGGCATCTGATGATGGACCGATTTATGTTAATGCTAAGCAGTACCATGGAATCATCCGACGCCGGCAGTCCCGGGCAAAGGCTGTGCTGGAGAATAAAATGACCAAACGTCGCAAGCCTTATATGCATGAATCGCGCCATCTCCATGCGATGCGTCGCCCAAGAGGATGCGGTGGTCGGTTCCTGAACACAAAAGCCATGAAGAGCAGCAATGCAAAAAGTGGAAGTGAAGGGAATAAAACTGGTGATGGTCAAATGCTGTCCGCTGGTTCTCAAAGCTCCGAAGTGCTGCAATCATCAAAGGAAACAAGTGGCAGAAGTCCACACATGTGTGGGACAGAGGTGACTAGCATGTATACAAGGGGAGGTCTTGATCATGGCTTTACGTTCAACCATCTCGGACCCGCTGTTCATCACACTCTTGTAGGCATGATGGATGGTCACAGTGGCGGGGGCATGGTTATACCCGCTAAATGGGTTGCAGCACCAGGTAAGTGCTGCAGCCTTGAACTCGAATGGAAAGCCTCGATGTTGCTTCTCTTCCTTCTTCATTTGTGTGCCATGTCTATTTCTCATGCCTGA 1029 0.4742 MAMQTVYFKEADGATHRSAGHMSSVTSAPWWSALGSQTIFGESCGQMKHFSLEIPNYVDQLAANKQAGRGAEQVCTQFAIFSDDCKMSGDQKSQTGLSLQSSIPDPHTRVELGINQPVICAKYPYMDQFYGLFSTYGPQVPGRMMLPLNMASDDGPIYVNAKQYHGIIRRRQSRAKAVLENKMTKRRKPYMHESRHLHAMRRPRGCGGRFLNTKAMKSSNAKSGSEGNKTGDGQMLSAGSQSSEVLQSSKETSGRSPHMCGTEVTSMYTRGGLDHGFTFNHLGPAVHHTLVGMMDGHSGGGMVIPAKWVAAPGKCCSLELEWKASMLLLFLLHLCAMSISHA 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0857 342 Gene3D - 153 215 - -
Lele06g0857 342 Pfam CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 156 210 IPR001289 GO:0003700|GO:0006355
Lele06g0857 342 SMART cbf3 152 213 IPR001289 GO:0003700|GO:0006355
Lele06g0857 342 PRINTS CCAAT-binding transcription factor subunit B signature 156 178 IPR001289 GO:0003700|GO:0006355
Lele06g0857 342 PRINTS CCAAT-binding transcription factor subunit B signature 187 210 IPR001289 GO:0003700|GO:0006355
Lele06g0857 342 MobiDBLite consensus disorder prediction 215 260 - -
Lele06g0857 342 PANTHER TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED 69 256 IPR001289 GO:0003700|GO:0006355
Lele06g0857 342 ProSiteProfiles NF-YA/HAP2 family profile. 153 213 IPR001289 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0857 Lele-ChrLele06 5332427 5338021 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0857 1 319 CCAAT-HAP2 Transcription Factor Family AT3G05690 39.080 1.12e-52 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YA Lele06g0857 CBFB_NFYA 1e-25 No_clan