Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0842 ATGGATCGCCACCATCATCGCGAAGAAACACCGCCCCCAATAACTCGAAGTCGATCCATGGCGGCTGCCATTTCATCGATAGTTAATGGGGAAGAGCCTGCAAGAGGAGCGACAAGAAAAGATGCGTACACATCTTCTTGGACTCAAGAATCCAAGAACCCTAGCTTCCCTCTGGTGCAGGGCACAGCCTCGGATGGAAACAAAAACCTCAAGAAGCTAAGGCCTCGCCTTCTTCTACTTCTCACTACTTTATTTTTCTCCAGAAACGAAATGGAGAAGAAGAATTCGAGTGGGTTAGCGAGGACAATATCGGAGCAGTTAGTGGAGACGGTGGTTGCAGAGCTGAAGTCGGCGCCGTCGAGCGAGTCGATAAACGGGATAATGGATAGTGGGGGAAGCGGAGGAACACTGTCGAGGAAGTCGAGCAGGAGGATGTCGCCGGGAGGGAAAAACAGTCACATAAGGAAGAGTAGGAGTGCTCAGATAAAGGTGGATTTGGACGAAGTAGGCAGCGGCGCCGCCCTGAGCCGAGCTTCCAGCGCCAGCTTGGGCCTCTCCTTCTCCTTCACCGGCTTCACGCTTACTCCTGATGAAATCGCTGACTCAAAGCCCTTCAGGGACCAAGACATTCCGGAGGATATTGAAGCTGGAACTTACCACTTCAAGTTTCAAACAGAACCCACTTTGCCTATTTTCCTCAAGTTCAAGGATGTGAGCTACAAGGTGGTGATCAAGGGCATGACAACAAGTGAGGAGAAGGATATCTTAAATGGGATTACTGGTTGCGTGAATCCAGGCGAAGTTTTGGCACTGATGGGACCCTCAGGGAGTGGAAAGACTACCCTTTTGAATCTTCTAGGAGGCCGGTTGATTCAGTCCGCTGCTGGTGGTCCTATCACTTACAATGAACAGCCATATAGCAAATATCTCAAAAGCAAGATAGGATTTGTGACTCAAGATGATGTTCTGTTTCCTCACCTTACTGTGAAAGAAACACTTACATACGCAGCCCGTCTACGACTACCCTATACATTAACAAAGGACCAGAAGGAAAAAAGAGCCTTGGATGTCATCTATGAACTTGGCTTGGAAAGGTGCAAAGACACTATGATCGGTGGCTCCTTTGTTCGGGGGGTATCTGGAGGAGAGAGGAAAAGAGTTTGCATCGGTAATGAGATTATAATCAATCCTTCGCTTCTCTTTCTGGATGAACCAACTTCTGGTTTGGATTCTACAACAGCCTTGAAGATCGTTCAGATGCTACAAGACATAGCAGAGGCTGGTAAAACAGTGGTGACAACAATTCATCAACCATCAAGCAGACTATTTCACAAATTTGATAAGTTGATCCTACTGGGAAAAGGAAGCTTGCTTTACTTTGGCAAAGCATCTGAAGCAATGCCTTATTTCCAATCTATAGGATGCTCCCCTCTTATTGCCATGAACCCAGCAGAGTTTTTGCTAGACCTCGCAAATGGAAACATAAATGATGTTTCTGTGCCATCTGAGTTAGAGGATAAAGTGCAGATGGGACACGCAGTAGTTAGAACGAAGAATGGGAAACCATCACCAGCAATGGTACAAGAGTATCTAGCGGAAGCATACGAGAATCGAGTTTCTGAAACGGAGAAGAGAAAGCTAATGGTGCCCATCCCACTTGATGAATCACTGAAGTCTAAGGTTTGTTCTCGTAAAAGACAGTGGGGTGCCAGGTGGTGTGAGCAGTATTCCATACTGTTCTGCAGAGGAATAAAAGAACGGAGGCATGACTATTTCAGCTGGTTAAGAATCACCCAAGTTCTATCTACTGCAGTCATCTTAGGATTACTTTGGTGGCAATCAGATGCTAACAATCCAAAAGGTCTTCAAGACCAGGCAGGGTTACTTTTCTTCATAGCGGTGTTCTGGGGATTCTTTCCGGTGTTCACAGCAATATTCACATTTCCTCAAGAGAGAGCAATGTTGGCAAAGGAGAGAGCAGTTGACATGTACAGGCTAAGTGCATATTTTGTGGCTAGGACTACAAGTGATGTTCCATTGGACTTAATACTACCAGTTCTGTTCCTGCTGGTTGTCTATTTCATGGCCGGTCTGAGACAAAGTGCCGACTCCTTTTTCTACAGCATTCTCACCGTCTTCCTCTGCATCGTGGCAGCTCAGGGACTTGGACTCGCTATTGGGGCCACACTAATGGACATGAAGAAGGCAACAACTCTAGCTTCAGTGACTGTAATGACCTTCATGCTGGCCGGAGGATTTTTCGTAAAGGAAGTACCGAAATTCATATCGTGGATTCGGTACATTTCATTTAACTACCACACATACAAACTTCTGCTGAAAGTGCAATATGGAGGGCTCTCGCGATACATAAATGGGATGAGAATTGACGATGGTTGGACAGAGGTTGGAGCTCTGATAGCAATGGTTTTTGGTTATCGGTTATTAGCGTACCTTTCGTTGCGGCGGGTGAAGGTTCCATGCGGAGCTTAG 2490 0.4643 MDRHHHREETPPPITRSRSMAAAISSIVNGEEPARGATRKDAYTSSWTQESKNPSFPLVQGTASDGNKNLKKLRPRLLLLLTTLFFSRNEMEKKNSSGLARTISEQLVETVVAELKSAPSSESINGIMDSGGSGGTLSRKSSRRMSPGGKNSHIRKSRSAQIKVDLDEVGSGAALSRASSASLGLSFSFTGFTLTPDEIADSKPFRDQDIPEDIEAGTYHFKFQTEPTLPIFLKFKDVSYKVVIKGMTTSEEKDILNGITGCVNPGEVLALMGPSGSGKTTLLNLLGGRLIQSAAGGPITYNEQPYSKYLKSKIGFVTQDDVLFPHLTVKETLTYAARLRLPYTLTKDQKEKRALDVIYELGLERCKDTMIGGSFVRGVSGGERKRVCIGNEIIINPSLLFLDEPTSGLDSTTALKIVQMLQDIAEAGKTVVTTIHQPSSRLFHKFDKLILLGKGSLLYFGKASEAMPYFQSIGCSPLIAMNPAEFLLDLANGNINDVSVPSELEDKVQMGHAVVRTKNGKPSPAMVQEYLAEAYENRVSETEKRKLMVPIPLDESLKSKVCSRKRQWGARWCEQYSILFCRGIKERRHDYFSWLRITQVLSTAVILGLLWWQSDANNPKGLQDQAGLLFFIAVFWGFFPVFTAIFTFPQERAMLAKERAVDMYRLSAYFVARTTSDVPLDLILPVLFLLVVYFMAGLRQSADSFFYSILTVFLCIVAAQGLGLAIGATLMDMKKATTLASVTVMTFMLAGGFFVKEVPKFISWIRYISFNYHTYKLLLKVQYGGLSRYINGMRIDDGWTEVGALIAMVFGYRLLAYLSLRRVKVPCGA 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0842 829 Pfam ABC transporter 256 407 IPR003439 GO:0005524
Lele06g0842 829 MobiDBLite consensus disorder prediction 41 67 - -
Lele06g0842 829 Gene3D - 232 472 IPR027417 -
Lele06g0842 829 MobiDBLite consensus disorder prediction 1 20 - -
Lele06g0842 829 SMART AAA_5 265 456 IPR003593 -
Lele06g0842 829 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 233 471 IPR027417 -
Lele06g0842 829 Pfam ABC-2 type transporter 575 783 IPR013525 GO:0016020|GO:0140359
Lele06g0842 829 MobiDBLite consensus disorder prediction 119 155 - -
Lele06g0842 829 MobiDBLite consensus disorder prediction 28 68 - -
Lele06g0842 829 Pfam ABC-2 type transporter 436 540 IPR043926 GO:0140359
Lele06g0842 829 ProSitePatterns ABC transporters family signature. 379 393 IPR017871 GO:0005524|GO:0016887
Lele06g0842 829 FunFam ABC transporter G family member 22 243 473 - -
Lele06g0842 829 MobiDBLite consensus disorder prediction 119 158 - -
Lele06g0842 829 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 180 817 - -
Lele06g0842 829 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 233 479 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0842 Lele-ChrLele06 5222066 5232152 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0842 255 493 Calmodulin-binding Proteins AT2G36910 27.984 1.81e-14 75.9