Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0841 ATGGGAAATAAACCAAGCGGGAATGGCTTCTTGGATTCTGTTTCGGCCGCTGTTTTTCGAGAGAGCCCTCTGGGCGTTAGGCTTCCTGCTCGGGACGCCTCCACCACCGATAAAACTCCGGCAAATGCAGGTCCTGATTCCTCCAAAGATTCCGCTGCTCCTAACGGTTCTGAATCTTCGGGCTCAGGTCAGAGTAGATCACCTGGAACGGTGAAGATTGCCGATGTCAAATCGGAACCACGGGAGCCTGAAAATCGTCCCGCTGATGGCGCAAAATCTGACAAATCCGCTCACGTTAAAAGGGCGTGCAGTGTTGGACGTCAAATTGAATCGGACGGCGTTGCTGTCAATCTTGTTATGGAATTTTGTTCTGGTGGGGAGCTTTTTGACAGGATCATACAGATAGGACACTACACTGAGAGAAAGGCGGCTCAGCTCGCAAGGGTAATGGCCCATGTTGTGGAGGCCTTTCATTCTTTGGGTGTCATGCATCGGGACTTGAAGCCGGAGAATTTTCTGGTCGCTAGCCAGGACGAAGATTCACTTCTCAAAACAATAGATTTTGGGCTTTCCGTGTTCTTCCAACCGGGTCAAACATTCACTGATGTAGTTGGCAGCCCATACTATGTGGCCCCTGAAGTTCTGCTGAAGCACTATGGTCAAGAATGTGATGTTTGGAGTGTTGGGGTAATCATTTATATATTACTATGTGGAATTCCTCCATTTTGGGATGGCCACCCTTGGGTTCAGGTGGATGGTGTTGCTCCTGACAAACCTCTTGATTCTGCTGTCTTGTCTCGTTTGGAGAAATTTTCTGCTTTGAACAAGCTTAAGAAGATGGCTATTCGAGTAATTGCCGAAAGTCTGTCTGAGGAGGAAATTGGAGGGCTGAAAGAAATGTTCAAGATGATAGACGCAGATAATAGTGGACACATTTCTCTAGAGGAACTGAAAAATGGATTGGAGAGAGCGGGTGCCAATCTCCAGGAACCTGAAATTGTTAGATTAATGCAAGCGGCGGACATTGATGATAGTGGCACCATCGACTATGGTGAATTCATAGCAGCCATGCTTCATATGAACAAGGTTCATAGGGAGGAGCATCTATTTGCAGCTTTCAATTACATTGACAAAGATGGGAGTGGGTACATCACACGAGATGAACTTGAACACGCCTGCGAACAGTTTGGTCTGCAAGATGTTCAACTAGATGACATGATAAAAGAAATTGACCGGGATAATGATGGACGAATTGATTACAGTGAGTTTGTTGCAATGATGGAAGACGCTGGTATTGGCAGGAAGGGACTAGAAAATACAATGAGCAGAATTGCGGGCGCTTTCAAGCCTCACTGA 1356 0.4661 MGNKPSGNGFLDSVSAAVFRESPLGVRLPARDASTTDKTPANAGPDSSKDSAAPNGSESSGSGQSRSPGTVKIADVKSEPREPENRPADGAKSDKSAHVKRACSVGRQIESDGVAVNLVMEFCSGGELFDRIIQIGHYTERKAAQLARVMAHVVEAFHSLGVMHRDLKPENFLVASQDEDSLLKTIDFGLSVFFQPGQTFTDVVGSPYYVAPEVLLKHYGQECDVWSVGVIIYILLCGIPPFWDGHPWVQVDGVAPDKPLDSAVLSRLEKFSALNKLKKMAIRVIAESLSEEEIGGLKEMFKMIDADNSGHISLEELKNGLERAGANLQEPEIVRLMQAADIDDSGTIDYGEFIAAMLHMNKVHREEHLFAAFNYIDKDGSGYITRDELEHACEQFGLQDVQLDDMIKEIDRDNDGRIDYSEFVAMMEDAGIGRKGLENTMSRIAGAFKPH 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0841 451 SUPERFAMILY Protein kinase-like (PK-like) 116 255 IPR011009 -
Lele06g0841 451 FunFam Calcium-dependent protein kinase 1 257 431 - -
Lele06g0841 451 ProSitePatterns EF-hand calcium-binding domain. 305 317 IPR018247 -
Lele06g0841 451 ProSiteProfiles Protein kinase domain profile. 1 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele06g0841 451 MobiDBLite consensus disorder prediction 75 99 - -
Lele06g0841 451 PANTHER SERINE/THREONINE-PROTEIN KINASE 113 243 - -
Lele06g0841 451 MobiDBLite consensus disorder prediction 35 71 - -
Lele06g0841 451 Pfam EF-hand domain pair 297 357 IPR002048 GO:0005509
Lele06g0841 451 Pfam EF-hand domain pair 366 428 IPR002048 GO:0005509
Lele06g0841 451 CDD EFh 297 357 IPR002048 GO:0005509
Lele06g0841 451 SMART efh_1 332 360 IPR002048 GO:0005509
Lele06g0841 451 SMART efh_1 368 396 IPR002048 GO:0005509
Lele06g0841 451 SMART efh_1 402 430 IPR002048 GO:0005509
Lele06g0841 451 SMART efh_1 296 324 IPR002048 GO:0005509
Lele06g0841 451 ProSiteProfiles EF-hand calcium-binding domain profile. 292 327 IPR002048 GO:0005509
Lele06g0841 451 Pfam Protein kinase domain 114 245 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele06g0841 451 SMART serkin_6 67 301 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele06g0841 451 CDD EFh 368 427 IPR002048 GO:0005509
Lele06g0841 451 Gene3D - 256 430 - -
Lele06g0841 451 ProSiteProfiles EF-hand calcium-binding domain profile. 364 397 IPR002048 GO:0005509
Lele06g0841 451 ProSitePatterns Serine/Threonine protein kinases active-site signature. 162 174 IPR008271 GO:0004672|GO:0006468
Lele06g0841 451 ProSitePatterns EF-hand calcium-binding domain. 341 353 IPR018247 -
Lele06g0841 451 ProSiteProfiles EF-hand calcium-binding domain profile. 328 363 IPR002048 GO:0005509
Lele06g0841 451 SUPERFAMILY EF-hand 289 427 IPR011992 -
Lele06g0841 451 MobiDBLite consensus disorder prediction 20 99 - -
Lele06g0841 451 Gene3D Transferase(Phosphotransferase) domain 1 123 254 - -
Lele06g0841 451 ProSitePatterns EF-hand calcium-binding domain. 411 423 IPR018247 -
Lele06g0841 451 ProSiteProfiles EF-hand calcium-binding domain profile. 398 433 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0841 Lele-ChrLele06 5216857 5221129 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0841 112 438 EF-hand Containing Proteins AT2G38910 66.138 0.0 519
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lele06g0841 Pkinase 2.4e-38 CL0016