Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0839 ATGTCACTCACTATCGCGGATGATACAAAGTACAAACAACGCAAAGCAGTTCCATCTTCCACGAATTCAGTAAAATGCTGTGACTGCCGCTGTAGTTGCTCGTTGGCAGCTGATTCTTCGGCAGCCTGGCTTCGTACTGTTAAACGGAAGCTTGACGAGTTTGAACAGGACGACAAATTCTCTATACCTGAGTTGGATTACTCCTCAGTTGCACGGGTCCAAATTGAAAATGAATGTGAAGCGTTACGTGAGACAGTGACTAGGCAACAGCAAGCAATACAAGATCTATGTGCTGAATTGGAGGAGGAGAGAAATGCTTCAACAACGGCAGCAAATGAGGCCATGTCTATGATATTGAGATTGCAGAGGGAGAAAGCAGAGATCCAAATGGAAGCTCGGCAGTTCAAGCGTTTTGTAGAGGAGAAGACTTCACATGACCAGGAGGAGCTTTTAGAATTGGAGGACTTGTTGTATAAGAGAGAGCAGACAATACAAGCGCTTATATGTGAAGTTCAGGCTTATAAGCACAGGATGATGAGTTATGGCCTCACGGAATCAGAGGCAGCAGGTGAAAGGAACCTGAGCTGGGGGGAATTGGGTGATCAATATGAACTCCCCACCTATGACTACCCTCTTTTAAAATGCATTGGACACGCTGCCACGGATGCCGAGAATGATGACACAGATATTGAGAAATATACATTCGGTGAAACTCCTTCCGATCAATTGAGAAACTTGGAAAATAGAATCTCCCAAATGGAGAGAAGTTCTATTCATAACCAAGTGGATGGGGATTATACGGGGAACACTATTCTGGAGAAGGAGTTAGATGGACAGTCTCCAAGGTGGACTAAACATTTGAGAAAGATATCCAACGAAACAGGTTCATTCATAGTGGGTTCTCCCAATAGCTTTAGGAAGATGGATTGTGTCTCACAACCAGATGACCCTTCCAATTTGAAAAGGGCGGATTATGCATCAGAATCTGGTGATGATATGGGTGATAGAGTTTATACGGTTGACTCTGTTCATACGGGCACACCACACAAAGGTTTTTCAGAGTCCAAATATGGAGCTGTTAATGAAGATTATTCGACTGCTCCAATGGAGTCACTAAATCATGCTGCTTTTGAAGATCCCGACATAAAGAAGCTTTACATGAGACTTCAAGCTCTTGAGGTTGATAGGGAATCAATGAGGCAGGCAATCATTTCAATGCGCACTGATAAAGCACAGGTTTTGCTACTTAAGGAAATAGCTCAACGTTTGTGCAAAGGGATGTCCCCGCAAAGAAGAATGACAGTGAAGAAGCCAATTGTTGTTCGTAGTTTTTCATTCTTGTCACTTTTTAAGTGGATGATATCGTTGGTTTTTTGGAGAAAGAAAGCTGGTCAAAGCAAGTATATGTTTGGGCTACCAGCCAATGGCGTGGGCTTACTAATGCTTCTGGACAAGAGGCCCCGTGGGAGGCCATGGAGATGCGTCTCAGTCACCCAGTTGGGATATTAG 1509 0.4387 MSLTIADDTKYKQRKAVPSSTNSVKCCDCRCSCSLAADSSAAWLRTVKRKLDEFEQDDKFSIPELDYSSVARVQIENECEALRETVTRQQQAIQDLCAELEEERNASTTAANEAMSMILRLQREKAEIQMEARQFKRFVEEKTSHDQEELLELEDLLYKREQTIQALICEVQAYKHRMMSYGLTESEAAGERNLSWGELGDQYELPTYDYPLLKCIGHAATDAENDDTDIEKYTFGETPSDQLRNLENRISQMERSSIHNQVDGDYTGNTILEKELDGQSPRWTKHLRKISNETGSFIVGSPNSFRKMDCVSQPDDPSNLKRADYASESGDDMGDRVYTVDSVHTGTPHKGFSESKYGAVNEDYSTAPMESLNHAAFEDPDIKKLYMRLQALEVDRESMRQAIISMRTDKAQVLLLKEIAQRLCKGMSPQRRMTVKKPIVVRSFSFLSLFKWMISLVFWRKKAGQSKYMFGLPANGVGLLMLLDKRPRGRPWRCVSVTQLGY 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0839 502 Coils Coil 382 402 - -
Lele06g0839 502 Coils Coil 111 131 - -
Lele06g0839 502 ProSiteProfiles GTD-binding domain profile. 77 175 IPR007656 -
Lele06g0839 502 PANTHER BNAANNG28530D PROTEIN 72 439 - -
Lele06g0839 502 Coils Coil 72 106 - -
Lele06g0839 502 MobiDBLite consensus disorder prediction 312 334 - -
Lele06g0839 502 Pfam Zein-binding 81 171 IPR007656 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0839 Lele-ChrLele06 5207579 5210763 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0839 06 5207579 5210763 Lele13g1584 13 24894332 24896222 CCT
Lele06g0839 06 5207579 5210763 Lele14g1515 14 23291836 23293885 CCT
Lele06g0839 06 5207579 5210763 Lele15g0834 15 4836672 4838551 CCT
Lele06g0839 06 5207579 5210763 Lele16g0852 16 4778886 4780883 CCT
Lele06g0839 06 5207579 5210763 Lele06g0839 06 5207579 5210763 ECH
Lele06g0839 06 5207579 5210763 Lele07g1019 07 6123276 6125530 hybridization
Lele06g0839 06 5207579 5210763 Lele08g0828 08 5219802 5223015 hybridization