Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0831 ATGCTGACTCCAGCTCAAATAATTTTAAATGGTTGCGCCGCTCGCTCATTCCCGCCTCTCGCATTATTCACAGTCAGTTGGATCAGGATGGAGACTCAGGCCAAGCATGTTGTGGTTGTTAAAGTTATCGGTCGTACTGGTTCCAGAGGGCAGGTGACTCAGGTTAGAGTCAAGTTTTTGGATGATCACAACCGGTATATCATGAGGAATGTGAAAGGACCAGTGAGAGAAGGAGACATTCTCACCCTTCTTGAGTCTGAAAGAGAAGCAAGGAGATTGCGCTAG 285 0.4702 MLTPAQIILNGCAARSFPPLALFTVSWIRMETQAKHVVVVKVIGRTGSRGQVTQVRVKFLDDHNRYIMRNVKGPVREGDILTLLESEREARRLR 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0831 94 Pfam Ribosomal protein S28e 33 93 IPR000289 GO:0003735|GO:0005840|GO:0006412
Lele06g0831 94 CDD S1_S28E 35 94 IPR000289 GO:0003735|GO:0005840|GO:0006412
Lele06g0831 94 Hamap 30S ribosomal protein S28e [rps28e]. 30 94 IPR000289 GO:0003735|GO:0005840|GO:0006412
Lele06g0831 94 ProSitePatterns Ribosomal protein S28e signature. 85 93 IPR028626 -
Lele06g0831 94 FunFam 40S ribosomal protein S28 29 94 - -
Lele06g0831 94 PANTHER 40S RIBOSOMAL PROTEIN S28 30 94 IPR000289 GO:0003735|GO:0005840|GO:0006412
Lele06g0831 94 SUPERFAMILY Nucleic acid-binding proteins 30 94 IPR012340 -
Lele06g0831 94 Gene3D - 29 94 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0831 Lele-ChrLele06 5143198 5144822 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0831 30 94 Cytoplasmic Ribosomal Protein Gene Family AT5G03850 86.154 3.79e-34 110