Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0822 ATGCGTAGGTACCCGGCCCTCTTTGTAGAATTTCCACATCCTCGTTGGCCTAATTTGCCTTGCTTCCGTTTGACAGATACTGCAGTCTCGTTAGACTCGCAAGACCACAGCATTTACGAGGCCCGTGAGAGTGTTTTGGAACGGCTTTTTAAGGTACTTATGATGATGAGAACTCGAACTGTGCCGCTGCAGCCTTTGAAATGGGATCTGGGTTTACCGGATTGTTTTGAGAAAACATTTGTTCGAAAATACCCAGATCATTTTCGATTTGTCAATGCCTCAAATGCTGTCACCTGCCTGCGACTAGCAAATTGGTGTGAGGAATTTGCAGTTTCAGCATTACAAAAGAGCAATGAAAGCAGGACATGTGGGGATGATTACAGGCAATTCAAGAGAGGGCAAGCAGCTCTGGTTTGCCATGAATTTTCCAAGGGGGTATTGAGCACAGAAGAAGGAGGGTATCAACGTGGAAAACTAGTAGATCCACATCCTATGGCTCGTCTCAGAGAGAAGTTTTATCATGTAATGAGGACGGGGCTTCTTCATCGTGGAAAAGGCGAGAACTTTATAGATCAAGAAGACTTATTACTAAACGGTGAAGTGGATGAAACAGGGCTGGGAGAATCTGAGGAGGAAGATTCTGGAACAGGTGATGAATTCTATGAGGTTGAAGATTCAGACCTAGAGGGAGCGTCTGGAGGAGAGTAG 708 0.4534 MRRYPALFVEFPHPRWPNLPCFRLTDTAVSLDSQDHSIYEARESVLERLFKVLMMMRTRTVPLQPLKWDLGLPDCFEKTFVRKYPDHFRFVNASNAVTCLRLANWCEEFAVSALQKSNESRTCGDDYRQFKRGQAALVCHEFSKGVLSTEEGGYQRGKLVDPHPMARLREKFYHVMRTGLLHRGKGENFIDQEDLLLNGEVDETGLGESEEEDSGTGDEFYEVEDSDLEGASGGE 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0822 235 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 153 208 IPR045040 GO:0003723
Lele06g0822 235 Pfam Plant organelle RNA recognition domain 1 123 IPR021099 GO:0003723
Lele06g0822 235 MobiDBLite consensus disorder prediction 200 235 - -
Lele06g0822 235 MobiDBLite consensus disorder prediction 204 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0822 Lele-ChrLele06 5082805 5083793 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0822 06 5082805 5083793 Lele13g1575 13 24806679 24819472 CCT
Lele06g0822 06 5082805 5083793 Lele14g1497 14 23176576 23182320 CCT
Lele06g0822 06 5082805 5083793 Lele15g0848 15 4925097 4930592 CCT
Lele06g0822 06 5082805 5083793 Lele16g0868 16 4892466 4897276 CCT
Lele06g0822 06 5082805 5083793 Lele06g0822 06 5082805 5083793 ECH
Lele06g0822 06 5082805 5083793 Lele07g0996 07 5998847 6000685 hybridization
Lele06g0822 06 5082805 5083793 Lele08g0810 08 5093420 5094700 hybridization