Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0820 ATGCTGAGCGTGCTACGCGTGCACCTCCCCTCTGATATACCCATTGTTGGATGTGAGCTTACGCCGTACGTGCTCCTACGGCGACCCGATAAGCCTGTTACCACCGACGATGTGCCAGAGTCAGCCCCAATAGACGGCCATTTCCTACGTTACAAGTGGTATCGTGTGCAAAGTGATAAAAAGGTTGCTGTCTGCAGCATACATCCATCTGAACAGGCCACACTGCAGTGCCTTGGTTGTGTTAAAGCTAAAATACCTGTTTCGAAAAGCTACCATTGCACACCAAAGTGCTTTTCAGATGCATGGCAGCACCATCGTGTTCTTCATGATCGAGCTGCAAGTGCTGTTAATGAAAATGGGAATGAGGAAGAGGAGGTGTTTGGTCGCTTTAATAGTTCTGGATCTGGGGCAATGAATAATAGCTTATCTAGCTCTGCATCAAGTGCTGCTTTGACAAATGGGTCAGCACAGCTGCATCCATCAGTTGTTACCCAACGAAGTGGTGGTGAAACTTGGATTGAAGTTGGACGATTGAAAACATATACCCCAACAGTTGATGACATTGGTCATGTCTTGAAATTTGAGTGCGTGGTAGTTGATGCAGAGACAAAACTTCCTGTGGGGCATGTCAACACCATACTAACCTCCCGCGTCATTCCCGCACCATCGCCTAGTCCGCGTTGCCTGATACCTGTCGATGCGATAGGACCTTTAGATGCTGATGGACGTATAACATCTTCGGGAAGTTTTACTGTTCTATCGTACAACATTTTGTCTGATGCATATGCCTCAAATGATTTATACAGTTACTGTCCTTCATGGGCTCTTTCTTGGCCCTATCGTAGACAAAATTTGTTGAGAGAAATAGTTGGTTATCGTGCAGACATTATTTGCCTTCAAGAGGTCCAAAGTGATCATTATGAAGAATTTTTTTCTCCTGAATTGGACAAACATGGATATTATGGTTTATATAAGAGAAAAACAAATGAGGTATATGGCGGTAACAGCAATACAATTGATGGCTGTGCAACATTTTTCCGCCGGGACAAATTTTCACATGTGAAGAAATATGAGGTTGAATTTAATAAGGCTGCGCAGTCTTTGACAGATGCCATGATTCCAACAACCCAGAAGAAAACTGCTTTAAATCGTCTTGTTAAGGATAATGTTGCCCTAATAGTGGTTCTAGAAGCGAAAGTTGCCAATCAGCCAATTGATAATCCTGGGAAAAGGCAGCTTCTTTGTGTTGCTAATACACATGTAAACGTTCACCAAGATCTGAAGGATGTCAAACTCTGGCAGGTGCATACTCTTTTAAAAGGGTTAGAAAAGATAGCTGCAAGTGCAGACATTCCAATGCTGGTTTGTGGAGATTTTAATTCAGTTCCTGGAAGTGCCCCTCATGCACTTCTTGCAATGGGAAAGGTAGATCCGTTACATCCTGATTTAGCTGTTGATCCTCTCAATATCTTGCGTCCTTATGGCAAGTTGGTTCATCAGCTGCCACTGGTTAGTGCATACTCTTCTTTTGCAAGAACAGCAGGTCTTGGTTTTGAGCAGCACAAAAGGAGACTGGACAGTGCAACAAATGAACCCTTGTTCACAAATGTCACTAGAGATTTTATTGGCTCTCTAGATTACATCTTTTATACAGCGGATTCTTTGGTGGTGGAATCATATAGCGCTGTTAGCTGA 1695 0.433 MLSVLRVHLPSDIPIVGCELTPYVLLRRPDKPVTTDDVPESAPIDGHFLRYKWYRVQSDKKVAVCSIHPSEQATLQCLGCVKAKIPVSKSYHCTPKCFSDAWQHHRVLHDRAASAVNENGNEEEEVFGRFNSSGSGAMNNSLSSSASSAALTNGSAQLHPSVVTQRSGGETWIEVGRLKTYTPTVDDIGHVLKFECVVVDAETKLPVGHVNTILTSRVIPAPSPSPRCLIPVDAIGPLDADGRITSSGSFTVLSYNILSDAYASNDLYSYCPSWALSWPYRRQNLLREIVGYRADIICLQEVQSDHYEEFFSPELDKHGYYGLYKRKTNEVYGGNSNTIDGCATFFRRDKFSHVKKYEVEFNKAAQSLTDAMIPTTQKKTALNRLVKDNVALIVVLEAKVANQPIDNPGKRQLLCVANTHVNVHQDLKDVKLWQVHTLLKGLEKIAASADIPMLVCGDFNSVPGSAPHALLAMGKVDPLHPDLAVDPLNILRPYGKLVHQLPLVSAYSSFARTAGLGFEQHKRRLDSATNEPLFTNVTRDFIGSLDYIFYTADSLVVESYSAVS 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0820 564 Gene3D Endonuclease/exonuclease/phosphatase 226 563 IPR036691 -
Lele06g0820 564 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 152 558 - -
Lele06g0820 564 CDD Deadenylase_CCR4 252 559 - -
Lele06g0820 564 SUPERFAMILY DNase I-like 246 560 IPR036691 -
Lele06g0820 564 Pfam Endonuclease/Exonuclease/phosphatase family 253 557 IPR005135 GO:0003824
Lele06g0820 564 FunFam Carbon catabolite repressor protein 4 1 219 563 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0820 Lele-ChrLele06 5072000 5076244 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0820 06 5072000 5076244 Lele06g0820 06 5072000 5076244 ECH
Lele06g0820 06 5072000 5076244 Lele07g0994 07 5982902 5986963 hybridization
Lele06g0820 06 5072000 5076244 Lele08g0808 08 5082122 5087069 hybridization