Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0805 ATGGAGTTGGCCTTGAGCTTAGGAGACGCACCAAAGCCCTTCTCTTTTCTTGACAAGCTCGCCAATATGCCCCGCCAAGAACCTGCCTTTTGCATACCCCTCGCCGCCGCCGCAAGATGGAATCATCCCAGAGAAGGCGACGAAGACCGTCGGACCTCATCTGCTCCGCCCATTCAGCTCGATCTTCTTCCCTTCACCCCGCTTCCTCCTCCACCTCCTCGCCTTTCAATTCCCTGGCTCTCTCGTCCATTGGGTGGCGAAGATATTTCATCCAATAGAGTAGTGAATGCGAGCGGTTTGGATGTGAACAGTGCGCCGGCAGACGTAGATGAGGCCGACGACTCTGCGGCACTCTCATCTCCCAACAGTGAGATTTCATCATTTCACATGGATTTCCGCGTCGGAAATAGTCATGGCACCGGCAGTTACAAGAGAGAGCACGATGGCAACGCCGACAGACGCAGCGACGATGACGAAAACGGATCAACTCGCAAGAAACTCCGACTGTCTAAGGAACAGTCCGCTTTCCTCGAAGAGAGCTTCAAAGAACACGCCACTCTCAATCCAAAGCAGAAACTTGCTCTGGCGAAGCAGTTAGACCTTCGTCCTCGTCAAGTGGAAACGCTGACGGAGGAGAATAGGAGGCTACAGAAGGAGGTGCAAGAATTAAGGGCTTTAAAGACATCGCAGCCGTATTACATGCAGCTTCCGGCCACCACTCTCACCATGTGTCCCTCCTGTGAAAGGGTCGTTACCAAATCTTCAGCGCCGGAACCACATCCACAGCGACGGCGACCGCCACTTGCACCAGCAGTGTCTCTCGAATCCCGGTAG 834 0.542 MELALSLGDAPKPFSFLDKLANMPRQEPAFCIPLAAAARWNHPREGDEDRRTSSAPPIQLDLLPFTPLPPPPPRLSIPWLSRPLGGEDISSNRVVNASGLDVNSAPADVDEADDSAALSSPNSEISSFHMDFRVGNSHGTGSYKREHDGNADRRSDDDENGSTRKKLRLSKEQSAFLEESFKEHATLNPKQKLALAKQLDLRPRQVETLTEENRRLQKEVQELRALKTSQPYYMQLPATTLTMCPSCERVVTKSSAPEPHPQRRRPPLAPAVSLESR 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0805 277 MobiDBLite consensus disorder prediction 132 170 - -
Lele06g0805 277 Pfam Homeodomain 164 207 IPR001356 GO:0003677
Lele06g0805 277 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 206 258 - -
Lele06g0805 277 SMART HOX_1 162 224 IPR001356 GO:0003677
Lele06g0805 277 SUPERFAMILY Homeodomain-like 156 207 IPR009057 -
Lele06g0805 277 CDD homeodomain 164 206 IPR001356 GO:0003677
Lele06g0805 277 Coils Coil 206 229 - -
Lele06g0805 277 ProSiteProfiles 'Homeobox' domain profile. 160 220 IPR001356 GO:0003677
Lele06g0805 277 Gene3D - 170 215 - -
Lele06g0805 277 MobiDBLite consensus disorder prediction 140 170 - -
Lele06g0805 277 MobiDBLite consensus disorder prediction 252 277 - -
Lele06g0805 277 Pfam HD-ZIP protein N terminus 89 128 IPR006712 GO:0005634
Lele06g0805 277 SMART halz 197 236 IPR003106 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0805 Lele-ChrLele06 4941908 4943157 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0805 57 263 Homeobox Transcription Factor Family AT5G47370 42.972 7.80e-42 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Lele06g0805 Homeodomain 8.2e-06 CL0123