Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0730 ATGGGTAATTGTTGTGTAACTCCGTCTGGACCTCGTGAGACCAAGAAGAAGGGAAAGAAGAAGAAGAAGGAAAATCCATTTGCCACCAACGACGTAAACTACCTTGGCAACGGTGGAAGCAAGCTCTCCGTTCTGAGCGATCCGACGGGTCACGAAATCGAGCGCAAATACGAGCTGGGTCGCGAGCTTGGAAGGGGAGAATTCGGGATAACCTACCTGTGTACCGATAGAGAGACGGGTGAAGTTTTAGCTTGCAAATCGATATCGAAGAAGAAGCTGAGAACAGCTATAGATATTGAGGATGTGAGGAGAGAAGTTGAGATCATGAAGCATTTACCAGAGCATCCCAACATCGTGACCTTAAAGAACACCTATGAAGACGACAATGCCGTTCATCTGGTGATGGAATTGTGCGAAGGAGGAGAATTGTTCGATCGGATTGTTGCGCGTGGGCACTACACAGAACGCGCCGCCGCAGTGGTCACCCGGACGATTGTTGAAGTTGTGCAGATGTGCCACAAACAAGGTGTGATGCATCGAGATCTCAAACCGGAGAACTTTTTGTTTGGAAACAAGAAAGAAACAGCACCTCTGAAGGCTATTGATTTTGGGCTGTCAGTTTTCTTTAAACCTGGTGAAAGATTTAATGAGATAGTTGGAAGTCCTTATTACATGGCTCCTGAGGTGCTAAAACGAAATTATGGCCCGGAAGTAGATATATGGAGTGCTGGAGTAATTCTTTACATCCTGCTTTGTGGTGTCCCACCGTTTTGGGCAGAAACTGAACAGGGAGTTGCACAGGCAATTATACGATCTGTTATTGATTTTAAAAGGGACCCATGGCCAAAAGTTTCTGATAATGCGAGAGACCTTGTTAAGAAAATGCTTGATCCTGACCCAAAGCGGCGGCTTTCTGCTCAGGAAGTGTTAGATCATCCATGGTTACAAAATGCCAAGAAAGCTCCTAATGTTTCATTAGGAGAAACTGTTAAGGCAAGGCTCAAGCAATTCTCAGTAATGAACAAGCTTAAGAAAAGAGCTCTAAGGGTGATTGCAGAGCATTTATCTGTAGAAGAAGTTGCAGGAATAAAAGAGGGATTCAAGGTGATGGATACTAGCAACAGAGGAAAAATTAACATCGATGAGCTACGAGCAGGTTTGCATAAACTAGGCCATCAAATGGCTGATGCTGACGTTCAAATTCTGATGGAAGCGGGCGATACGGATAAAGATGGATACCTAGATTATGGAGAATTTGTAGCCATTTCTGTTCATCTGAGGAAGATGGACAATGATGAGCACTTAAAGAAAGCCTTCCGATTCTTCGATCAGAACCAGAGTGGATATATAGAGATAGAGGAGCTACGCAATGCCTTAGCTGATGAAGTCGACACAAACAATGAAGAAGTCATTAATGCAATTATGCACGATGTCGACACAGACAAGGATGGAAGAATAAGTTACGAGGAATTCGCCGCAATGATGAAGGCTGGCACGGATTGGAGGAAGGCATCAAGACAGTATTCACGAGAGAGGTTCACAAGTCTCAGTCTGAAATTGATGAGGGACGGATCTTTGACATTAAACAACGACAAGCAATGA 1602 0.4426 MGNCCVTPSGPRETKKKGKKKKKENPFATNDVNYLGNGGSKLSVLSDPTGHEIERKYELGRELGRGEFGITYLCTDRETGEVLACKSISKKKLRTAIDIEDVRREVEIMKHLPEHPNIVTLKNTYEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAVVTRTIVEVVQMCHKQGVMHRDLKPENFLFGNKKETAPLKAIDFGLSVFFKPGERFNEIVGSPYYMAPEVLKRNYGPEVDIWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSDNARDLVKKMLDPDPKRRLSAQEVLDHPWLQNAKKAPNVSLGETVKARLKQFSVMNKLKKRALRVIAEHLSVEEVAGIKEGFKVMDTSNRGKINIDELRAGLHKLGHQMADADVQILMEAGDTDKDGYLDYGEFVAISVHLRKMDNDEHLKKAFRFFDQNQSGYIEIEELRNALADEVDTNNEEVINAIMHDVDTDKDGRISYEEFAAMMKAGTDWRKASRQYSRERFTSLSLKLMRDGSLTLNNDKQ 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0730 533 ProSitePatterns Serine/Threonine protein kinases active-site signature. 177 189 IPR008271 GO:0004672|GO:0006468
Lele06g0730 533 ProSitePatterns Protein kinases ATP-binding region signature. 63 86 IPR017441 GO:0005524
Lele06g0730 533 ProSitePatterns EF-hand calcium-binding domain. 407 419 IPR018247 -
Lele06g0730 533 SUPERFAMILY EF-hand 339 508 IPR011992 -
Lele06g0730 533 SMART serkin_6 57 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele06g0730 533 FunFam Calcium-dependent protein kinase 1 59 142 - -
Lele06g0730 533 CDD EFh 434 496 IPR002048 GO:0005509
Lele06g0730 533 Pfam Protein kinase domain 57 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele06g0730 533 ProSitePatterns EF-hand calcium-binding domain. 443 455 IPR018247 -
Lele06g0730 533 Gene3D Phosphorylase Kinase; domain 1 59 142 - -
Lele06g0730 533 Gene3D - 324 498 - -
Lele06g0730 533 PANTHER SERINE/THREONINE-PROTEIN KINASE 51 491 - -
Lele06g0730 533 SMART efh_1 362 390 IPR002048 GO:0005509
Lele06g0730 533 SMART efh_1 434 462 IPR002048 GO:0005509
Lele06g0730 533 SMART efh_1 398 426 IPR002048 GO:0005509
Lele06g0730 533 SMART efh_1 470 498 IPR002048 GO:0005509
Lele06g0730 533 ProSiteProfiles EF-hand calcium-binding domain profile. 358 393 IPR002048 GO:0005509
Lele06g0730 533 ProSiteProfiles EF-hand calcium-binding domain profile. 394 429 IPR002048 GO:0005509
Lele06g0730 533 ProSitePatterns EF-hand calcium-binding domain. 479 491 IPR018247 -
Lele06g0730 533 Pfam EF-hand domain pair 433 496 IPR002048 GO:0005509
Lele06g0730 533 Pfam EF-hand domain pair 363 422 IPR002048 GO:0005509
Lele06g0730 533 ProSiteProfiles EF-hand calcium-binding domain profile. 466 501 IPR002048 GO:0005509
Lele06g0730 533 ProSiteProfiles EF-hand calcium-binding domain profile. 430 465 IPR002048 GO:0005509
Lele06g0730 533 FunFam Calcium-dependent protein kinase 7 324 499 - -
Lele06g0730 533 Gene3D Transferase(Phosphotransferase) domain 1 143 323 - -
Lele06g0730 533 MobiDBLite consensus disorder prediction 1 32 - -
Lele06g0730 533 ProSiteProfiles Protein kinase domain profile. 57 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele06g0730 533 CDD STKc_CAMK 56 314 - -
Lele06g0730 533 FunFam calcium-dependent protein kinase 13 143 323 - -
Lele06g0730 533 SUPERFAMILY Protein kinase-like (PK-like) 55 323 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0730 Lele-ChrLele06 4498807 4502446 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0730 1 531 EF-hand Containing Proteins AT5G19450 80.300 0.0 891
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lele06g0730 Pkinase 1.3e-76 CL0016