Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0707 ATGCTATCATTTGACTTCTTTTACATGCCCGTGACCGCACTTCCTGTGGATCATTTTACATTCCCTTTAGATGATTGCATAGATGGACTGGTCGTTATGAGGCCCATCTTTGGGATAAAAGTACATGGAACCAGAATCAGAATAAAAAGGGAAAACAAGGTTTCTTCTTCTCTCTGTATTGTTGAACACTTGTCATACCAAACTCACATATCATTACAATTACTTACATTATTTAATTCTTCTGTTGTGCATGGATTGACTGGACAACAATTCACTTATGATGTCAGTGCATATGATGATGAGGAGGCCGCAGCTAGAGCTTACGACCTTGCAGCTCTGAAATATTGGGGCCCGGGGACTCTAATCAACTTTCCAGTGACTGATTATACAAGAGATCTTGAAGAAATGCAAAATTTTTCAAGAGAGGAATACCTTGCATCTTTACGGCGGAAGGGCAGTGGTTTTTCTAGAGGAATCTCTAAATATCGTGGACTCTCCAGATCTGTAACCACAATCTTAACTATGTTTTATCAATTGAAAAATGTACTTCTGCGTGAATTCAATTTATTTCCACCTGTTCTTTATCTGCTCTCAATTTCAAATGAAGGGCAAGGTGATGATTCGGCAGCAGAAAGCGAATATGTTAGTGGTTTCTGCATAGAACGAAAGATTGATTTAACAAATTACATCAAGGGGTGGGGATCCAATAAAAGTCGCCAACCTGATGCTGGAACAAAATCATCGGAAGTAAAAACGCAAGGATTTGCGGGAGATATTTGTGGTGAGCTCAAAACGCTGGAACAGGAACTCCAACCCACTGAGCCATACCAGATGCCTCAGTTAGGCTTGCCCCATGATAGGAAAAAACATAAAAGTTCTGCAGTCTCTGCCGTAAGTATTTTATCACGGTCGGCAGCATACAAGAGCCTGCAAGAGAAGGCGTCAAAGAGACAAGAAAATTACACTGATAATGATGAGGATGAGAACAAAAATACCATCAATAAGTACCATGGCAAGGCACTTGAGAGATCACTGAATCCTAATGGTGTGGATGAAAGACTTGACATTGCAATGGGAATGAGAGGGGCATTGTCTATTCAAAGAAATGTTTACCCATTGACTTCATTCTTGTCTGCACCACTCTTGACAGCCTATAATACCGCCGATCCCATGGTAGATCCTGTTCTCGGGACATCTCTTGTTCCTATGCTTCCTGCTGGCCTTTCTCGGGCAGCCGAGGTTGGTATATCTGCTCAATATGCTCTGCTCCCTGAAGGATTGAGGTTACCAAGACCGAGAGCAGTCCAACTTACACCACATTTCAGCCAGAAGTGTGATTGGACATCCCGGTATCTTAAGGTATCATCGTCTGATGAAGGAATTGTAGGGTTTGCAACGATGGGCACTGCGTGGAGGCAATTAAAGGTTATGCTATGGAAGAATTGGCTTCTCAAAATTCGTCATCCCTTTGCAACAAGTGCTGAGGTTTTGCTCCCAACTTTAGTGATGTTGCTGTTAATAGCTGTAAGGACTCGGGTTGATACACAAATTCATCCCGCACAACCGCACATCCGAGAAGGGATGTATGTAGAAGTGGGCAGGGGTATTTCTCCTAGCTTCCAACAAGTTTTGGAAGTTTTGTTGGCCAAGAAAGAGTATATAGCCTTTGCCCCTAATACAACAGAGACTGAGCAAATGATAGACATAATGTCAATAAAATTTCCCCTCTTGAAGCGTGTCAGTAAAATATACAAAGATGAGGCAGAGCTGGAGACTTACATACGCTCAGATGTTTATGGTACCTGCAATCAAGCAAGGAATTGTTTATATCAAAAAATCAAAGGAGCAGTGGTATTTCATGAACAAGGTCCTAAATCATTTGATTACAGCATACGCCTCAATCATACATGGGCTTTCTCTGGTTTTCCTGATGTTAAAACCATAATGGACACAAATGGCCCTTTTGTCCGTGACTTGGAACTTGGTGTTAGTGCAATACCAACAATGCAGTACAGCTTCAGTGGGTTTTTAACTCTCCAGCAAGTTGTTGATTCGTTTATAATATTCATGGCTCAGCAGTCTGACATAACCCCTAGCACTGAAAGTGTAGAGCATGCTCTGCCACGCTCCTATGATACTGATTTTTCTTTGAAAATTCCTTGGACTCAGTTTAGTCCTGCTCACATACGAATGGCTCCATTTCCCACTCGAGAGTACACTGATGATCAGTTCCAGTCAATTGTGAAGAATTTCATGGGGATTTTGTACTTATTGGGATTTCTGTATCCAATTTCTCGACTGATCAGTTATTCTGTGTTTGAGAAGGAACAGAAAATTAAGGAAGGGCTCTACATGATGGGCCTGAAAGATGGTGTGTTTCATCTCTCATGGTTTATAACATATGCTTTGCAGTTTGCAATCTCTTCTGGAATCATCACAGCTTGCACAATGGACAATTTATTCAAGTATAGCGATAAGACACTGGTGTTTGCATACTTTTTCCTTTTTGGGCTCAGTGCAATTATGTTGTCATTTTTGATATCAACATTTTTCAAGCGGGCCAAAACAGCTGTAGCAGTTGGAACCCTTTCTTTCCTTGGCGCCTTTTTCCCTTATTACACTGTGTATGACGAGGCAGTGTCTATTGTCTTAAAGATTGTCGCTTCTTTGCTTTCACCTACCGCTTTTGCTCTGGGGTCTATCAACTTTGCTGATTATGAGCGTGCCCATGTTGGACTTCGTTGGAGCAACATGTGGCGGGACTCATCTGGAGTAAACTTTTTGTTCTGTTTTCTGATGATGCTGCTTGATACACTGCTGTATTGTGTGATTGGTCTTTATCTTGATAAGGTTCTTCCAAGGGAGTATGGATCACAGTATTCATGGAACTTCATTTTCCAAAAAGGATTTTGGAGGAAGAAACAAACTGTAAAGCATCGTTCCTCCAGTTTAGACAGAGAAATTTCTGATAAGATTTCCAAGTCAAAGGGAATTTTCCTCGCTGAAAATGCTTTCAAACCTGCTATAGAAGCAATAAGTTTGGACATGAAACAACAAGAGCTTGATGGCAGGTGCATTAAAATTAGGGATTTGCATAAAGTGTATGCTTCTAAAAAGGGGGCTTGCTGTGCTGTTAACTCATTACGGCTTACGTTGTATGAAAATCAAATTCTTGCTCTACTAGGGCACAATGGAGCTGGAAAATCCACGACAATCTCAATGCTCGTTGGTCTTCTTCCTCCTACTTCAGGGGATGCTTTGGTGTTTGGAAAGAATATTTTAACTGATATTGATGAGATACGGAAGGTTTTGGGTGTCTGCCCCCAAAATGACATACTTTTTCCAGAATTGACAGTGAGAGAGCATCTAGAAATATTTGCGGTATTAAAGGGTGTGGAGGAAGACTCTTTGAAGGATGTTGTTTCTAATATGGTAGATGAGGTGGGTTTAGCTGATAAAATTAACACTCTAGTAGGAGCTCTTTCTGGTGGCATGAAGAGGAAGCTGTCTCTTGGAATTGCATTGATAGGAAACAGCAAGGTTATAGTTCTTGATGAGCCTACTAGTGGAATGGATCCATACTCAATGCGCTTGACTTGGCAGTTAATTAAAAAAATAAGAAAAGGAAGGATAATATTACTGACAACGCACTCTATGGATGAAGCGGACGAACTAGGTGATCGGATAGCTATCATGGCCAATGGTTCTCTGAAATGCTGTGGAAGTTCCCTTTTCTTGAAGCACCACTATGGTGTTGGTTATACTTTAACTCTTGTGAAGTCTGCACCCACTGCTTCAGTAGCTTCTGATATTGTCAAACGCCATGTCCCATCAGCTACTTGTGTGAGTGAGGTGGGAACTGAGATTTCCTTCAGGCTTCCTCTTCTGTCCTCATCAGCCTTTGAGAGCATGTTCAGGGAAATTGAAAGTTGCTTGAGAAAATCAGTTTCTAACTTGGAATCCACTGATCATGATGGAAAAGAGAGTCTTGGTATTGAAAGCTATGGTATATCTGTCACAACCCTGGAGGAGGTATTCCTGCGAGTTGCAGGATCAGACTATGATGAAGTTGAATGTTTTGAGGAGAAAAAGTGCCCCTATATGTCAGAGTCCTCGCCTTCTCATGCTTCTTATGATCATCCATCCAAAAACAGATGGCCGTTTGAATTTCTTGGACACTACAGGAAGATTGTTGGATTCTTATCTAGCACAGTGGCAAGAGCTTGTTATTTATTCTTTGCTACAGTGTCAAGTCTGATAAACTTCTTGAGTATGCTGTGTTGTAGCTGCTGTGTCATTACCAGGTCCACATTTTGTCAGCATTCCAAGGCTTTGTTCATTAAGAGAGCAATATCTGCTCGCAGGGATCACAAAACTATTGTTTTCCAGCTTCTGATTCCTGCTGTCTTCTTATTTATTGGCCTTCTGTTTCTCAAGCTTAAGCCACACCCTGATCAGCAGTCCTTGACCCTTACAACTTCTTATTTTAATCCTTTGCTTAGCGGAGGTGGCGGGGGAGGTCCAATTCCTTTTAATTTTTCTTTTCCAATTGCCGAAGAGGTAGCCAATTATGTCAAAGGAGGGGGGATTCAAAGGGTCAAACAAACTGTGTACAAATTCCCTAACCCAGAAAAGGCATTACATGAAGCAGTGGAAGTAGCAGGGCCAATTCTTGGACCTGCTTTACTTTCTATGAGTGAATATTTGATGTCTAGCTTTAATGAATCCTACCAGTCCAGGTATGGAGCAATTTTAATGGATGAGCAGTACAATGATGGAAGTTTAGGCTACACTGTTCTACACAACTGTTCTTGTCAGCATTCTGGTCCAACCTTTATCAATTTGATGAATGCTGCAATTCTTAGGCTTGCTACTCGTGACATGAATATGACAATTCAGACACGTAACCACCCTCTACCAATGACACAAAGCCAGCTCTTACAACGTCATGATCTGGACGCTTTTTCTGCCGCAATTATTGTCAATATTGCCTTCTCTTTTATACCGGCCTCATTTGCTGTTTCCATTGTAAAGGAACGGGAAGTTAAAGCAAAGCACCAACAACTAATCAGTGGGGTTTCTATTGTTTCATACTGGGCTTCTACATTTATATGGGACTTTGTGAGCTTCTTGTTTCCTACCTCCTTTGCGCTTGTTCTCTTTTACATATTTGGTCTGGATCAGTTTGTTGGAGGGCCTTCTTTGCTGCCAACAGTCCTCATGCTTTTGGAGTATGGACTGGCAATTGCATCATCAACATACTGTCTTACATTTTTCTTTTCTGACCATACCATGGCTCAGAATGTGGTTCTCCTTATCCACTTCTTCACTGGCCTAGTACTAATGGTTATTTCATTCATTATGGGACTGATACCATCAACAACAAGCGCCAATTCTTTTCTTAAGAACTTCTTCAGAATATCTCCTGGATTTTGTTTTGCTGATGGGTTTGCTTCACTAGCTCTCCTACGGCAAGGGATGAAAGATAAAACAAGTGATGGGGTGTTTGATTGGAATGTTACCGGTGCTTCTATCTGTTATCTTGCTCTTGAGAGCATTTGTTACTTTGTGTTAACACTTGGAATTGAAGTTTTTCCTTCTCTCAAATTGACTCTGTTCATGGTCAAAAAGTGGTGGGAAAATACCATCCCACGTAATAATCCTCCTTGTCAGGAAAAGCTATTAGAACCTTCCCTGGAAACTGTTGGTATGGACTTTGATGAAGATGTAGATGTGAAAACAGAAAGAAACAGGGTACTGTCAGGTTCCCTTGACAATGCCATCATCTATTTGTGTAACCTTCGTAAGGTCTATTATGAAGGGCGGCTTCACCAGCAAAAGGTTGCAGTAGATTCATTAACCTTCGCAGTTCAGGAAGGAGAATGCTTTGGCTTTTTAGGGACAAATGGAGCTGGAAAGACCACAACTTTGTCGATGTTGTGTGGAGAAGAATCTCCATCTGATGGGACTGCTTTTATTTTTGGCAAGGATATATATTCTCATCCCAAGGCTGCTCGCCAGCATATTGGTTATTGCCCACAATTCGATGCTCTATTGGAATATTTGACTGTACAAGAACATCTTGAGCTTTATGCTAGAATAAAGGGTGTTCCAAGTTGCATAATAGATAATGTTGTTTTGGAAAAGTTACAGGAGTTTGACTTGCTGAACCATGCTAATAAGCCATCATTTTCTCTTAGTGGAGGAAATAAAAGGAAGTTGTCGGTCGCAATTGCCATGATTGGAAATCCTCCTATTGTCATCCTTGATGAACCATCCACAGGTATGGATCCCATTGCCAAACGTTTCATGTGGGATGTAATATCTAGGATCTCAACGAGACGAGGAAAGACAGCAGTAATTTTGACTACCCACAGCATGAATGAAGCTCAAGCATTGTGTACGCGAATGGGAATAATGGTTGGTGGCCGATTAAGATGCATCGGAAGTCCACAGCACTTGAAAACAAGATTTGGGAATCATCTGGAATTAGAGGTGAAACCTACTGAAGTGAGCTCTGAGGACTTGGAAATACTCTGCAAAGCTATACAAGAAAGACTTTTTGATGTTCCATCTCATCCAAGAAGCTTACTTGATGGCCTTGAAATTTGCATTGGAGGCGCTGACTCCATTTCATCAGATGCCTCTTTCGCTGAACTTAGCTTGTCACGGGAAATGATTGTCTTCATTGGAAGCTGGCTTGGCAATAAAGAAAGAATAAAGATGCTTATCTCTTACACACATGTATCTGATGGGGCTTGTAGTGAACTGTTATCTGAACAACTGTTCCGAGATGGTGGTATTCCATTGCCGGTATTTTCTGAGTGGTGGTTGTCCAAAGAAAAGTTCTCGGCAATAGATGCATTTATTCTATCTTCTTTTCCTGAAGCAAGATGTCAAGGGTGCAATGGTTTGAGTATGAGATACCAGTTACCATATGGTGAAGGCTTTTCTCTTGCGGATGTTTTCGGACTTCTTGAAGGAAACAGAAATAGACTGGGCATTGCAGAGTACAGCATCAGCCAGTCAACTTTGGAGACCATATTTAACCATTTTGCAGCTAACTCATGA 7071 0.413 MLSFDFFYMPVTALPVDHFTFPLDDCIDGLVVMRPIFGIKVHGTRIRIKRENKVSSSLCIVEHLSYQTHISLQLLTLFNSSVVHGLTGQQFTYDVSAYDDEEAAARAYDLAALKYWGPGTLINFPVTDYTRDLEEMQNFSREEYLASLRRKGSGFSRGISKYRGLSRSVTTILTMFYQLKNVLLREFNLFPPVLYLLSISNEGQGDDSAAESEYVSGFCIERKIDLTNYIKGWGSNKSRQPDAGTKSSEVKTQGFAGDICGELKTLEQELQPTEPYQMPQLGLPHDRKKHKSSAVSAVSILSRSAAYKSLQEKASKRQENYTDNDEDENKNTINKYHGKALERSLNPNGVDERLDIAMGMRGALSIQRNVYPLTSFLSAPLLTAYNTADPMVDPVLGTSLVPMLPAGLSRAAEVGISAQYALLPEGLRLPRPRAVQLTPHFSQKCDWTSRYLKVSSSDEGIVGFATMGTAWRQLKVMLWKNWLLKIRHPFATSAEVLLPTLVMLLLIAVRTRVDTQIHPAQPHIREGMYVEVGRGISPSFQQVLEVLLAKKEYIAFAPNTTETEQMIDIMSIKFPLLKRVSKIYKDEAELETYIRSDVYGTCNQARNCLYQKIKGAVVFHEQGPKSFDYSIRLNHTWAFSGFPDVKTIMDTNGPFVRDLELGVSAIPTMQYSFSGFLTLQQVVDSFIIFMAQQSDITPSTESVEHALPRSYDTDFSLKIPWTQFSPAHIRMAPFPTREYTDDQFQSIVKNFMGILYLLGFLYPISRLISYSVFEKEQKIKEGLYMMGLKDGVFHLSWFITYALQFAISSGIITACTMDNLFKYSDKTLVFAYFFLFGLSAIMLSFLISTFFKRAKTAVAVGTLSFLGAFFPYYTVYDEAVSIVLKIVASLLSPTAFALGSINFADYERAHVGLRWSNMWRDSSGVNFLFCFLMMLLDTLLYCVIGLYLDKVLPREYGSQYSWNFIFQKGFWRKKQTVKHRSSSLDREISDKISKSKGIFLAENAFKPAIEAISLDMKQQELDGRCIKIRDLHKVYASKKGACCAVNSLRLTLYENQILALLGHNGAGKSTTISMLVGLLPPTSGDALVFGKNILTDIDEIRKVLGVCPQNDILFPELTVREHLEIFAVLKGVEEDSLKDVVSNMVDEVGLADKINTLVGALSGGMKRKLSLGIALIGNSKVIVLDEPTSGMDPYSMRLTWQLIKKIRKGRIILLTTHSMDEADELGDRIAIMANGSLKCCGSSLFLKHHYGVGYTLTLVKSAPTASVASDIVKRHVPSATCVSEVGTEISFRLPLLSSSAFESMFREIESCLRKSVSNLESTDHDGKESLGIESYGISVTTLEEVFLRVAGSDYDEVECFEEKKCPYMSESSPSHASYDHPSKNRWPFEFLGHYRKIVGFLSSTVARACYLFFATVSSLINFLSMLCCSCCVITRSTFCQHSKALFIKRAISARRDHKTIVFQLLIPAVFLFIGLLFLKLKPHPDQQSLTLTTSYFNPLLSGGGGGGPIPFNFSFPIAEEVANYVKGGGIQRVKQTVYKFPNPEKALHEAVEVAGPILGPALLSMSEYLMSSFNESYQSRYGAILMDEQYNDGSLGYTVLHNCSCQHSGPTFINLMNAAILRLATRDMNMTIQTRNHPLPMTQSQLLQRHDLDAFSAAIIVNIAFSFIPASFAVSIVKEREVKAKHQQLISGVSIVSYWASTFIWDFVSFLFPTSFALVLFYIFGLDQFVGGPSLLPTVLMLLEYGLAIASSTYCLTFFFSDHTMAQNVVLLIHFFTGLVLMVISFIMGLIPSTTSANSFLKNFFRISPGFCFADGFASLALLRQGMKDKTSDGVFDWNVTGASICYLALESICYFVLTLGIEVFPSLKLTLFMVKKWWENTIPRNNPPCQEKLLEPSLETVGMDFDEDVDVKTERNRVLSGSLDNAIIYLCNLRKVYYEGRLHQQKVAVDSLTFAVQEGECFGFLGTNGAGKTTTLSMLCGEESPSDGTAFIFGKDIYSHPKAARQHIGYCPQFDALLEYLTVQEHLELYARIKGVPSCIIDNVVLEKLQEFDLLNHANKPSFSLSGGNKRKLSVAIAMIGNPPIVILDEPSTGMDPIAKRFMWDVISRISTRRGKTAVILTTHSMNEAQALCTRMGIMVGGRLRCIGSPQHLKTRFGNHLELEVKPTEVSSEDLEILCKAIQERLFDVPSHPRSLLDGLEICIGGADSISSDASFAELSLSREMIVFIGSWLGNKERIKMLISYTHVSDGACSELLSEQLFRDGGIPLPVFSEWWLSKEKFSAIDAFILSSFPEARCQGCNGLSMRYQLPYGEGFSLADVFGLLEGNRNRLGIAEYSISQSTLETIFNHFAANS 2356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0707 2356 ProSitePatterns ABC transporters family signature. 2066 2080 IPR017871 GO:0005524|GO:0016887
Lele06g0707 2356 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1929 2167 IPR003439 GO:0005524
Lele06g0707 2356 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1928 2158 IPR027417 -
Lele06g0707 2356 Pfam ABC transporter 1046 1189 IPR003439 GO:0005524
Lele06g0707 2356 SMART AAA_5 1959 2146 IPR003593 -
Lele06g0707 2356 SMART AAA_5 1054 1236 IPR003593 -
Lele06g0707 2356 Gene3D - 1922 2170 IPR027417 -
Lele06g0707 2356 Gene3D - 1013 1262 IPR027417 -
Lele06g0707 2356 Pfam ABC transporter 1951 2093 IPR003439 GO:0005524
Lele06g0707 2356 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 1564 1865 IPR026082 GO:0016020|GO:0055085|GO:0140359
Lele06g0707 2356 SMART rav1_2 85 131 IPR001471 GO:0003700|GO:0006355
Lele06g0707 2356 Pfam ABC-2 family transporter protein 582 947 - -
Lele06g0707 2356 Pfam ABC-2 family transporter protein 1458 1860 - -
Lele06g0707 2356 CDD ABC_subfamily_A 1026 1247 - -
Lele06g0707 2356 CDD ABC_subfamily_A 1929 2155 - -
Lele06g0707 2356 FunFam ATP-binding cassette sub-family A member 12 1018 1263 - -
Lele06g0707 2356 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1023 1265 IPR027417 -
Lele06g0707 2356 FunFam ABC transporter A family member 1 1918 2172 - -
Lele06g0707 2356 ProSiteProfiles Zinc finger SWIM-type profile. 1413 1450 IPR007527 GO:0008270
Lele06g0707 2356 MobiDBLite consensus disorder prediction 311 336 - -
Lele06g0707 2356 Gene3D AP2/ERF domain 65 127 IPR036955 GO:0003700|GO:0006355
Lele06g0707 2356 ProSitePatterns ABC transporters family signature. 1161 1175 IPR017871 GO:0005524|GO:0016887
Lele06g0707 2356 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1026 1259 IPR003439 GO:0005524
Lele06g0707 2356 ProSiteProfiles AP2/ERF domain profile. 95 125 IPR001471 GO:0003700|GO:0006355
Lele06g0707 2356 SUPERFAMILY DNA-binding domain 97 126 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0707 Lele-ChrLele06 4331629 4362742 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0707 95 414 AP2-EREBP Transcription Factor Family AT2G41710 54.103 2.00e-79 269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0707 06 4331629 4362742 Lele06g0707 06 4331629 4362742 ECH
Lele06g0707 06 4331629 4362742 Lele08g0709 08 4350561 4386802 hybridization