Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0699 ATGAGTCGAGCTCTCGTTCAAGCAACAAAAGCTCCACAGCCTTGCTGCCACTGCCACCTCTGTATCATTATCGGCGCTTTTCATTCAGGGTTGTTGCTGGTCAATTTGTCGGCATTGCAGTGTAAGAATGAGAGTGGTGGTTTCAAATCGTTGGATTGGCAATGTGGCTCATACCAAGAAATGGAGAGTCTGTTGAAAGATTTCGTAATCGAGCACAAGAGACCATCTATTGAAGCTTCGAAGCGATGGAGATCCGCCGTCGCCTTAGTAAAGAACCACCGCAGACGCTTCCGCATGGTCCCAGATCTCCAGAAACGTTCCGAAGCCCAACAAACAATGAAGCAAATTCAGGATAAAGTTCGAGTTGCTCTCTTTGTTCAAAAGGCAGCACTGCACTTTATTAGTGCTGGATGTCAACTACCAGAAGAGGTGAGAGAAGCTGGTTTTGGCATTGATCCTGAAGTGGTTGCATCTATTGTTCGTGGCCACGATCATGAAGCACTGAAAAAATACGGTGGAGTCAAAGAAATTGCAATGAAACTCTCTACTTCAGTAGACAAAGGTATTAACGAAGACAGTGCATATACAAGGCAACAAGTTTATGGATTCAACCGTTACACAGAAAAACCTCCCAGAAGCTTCCTGTTGTTTGTATGGGAAGCATTACATGATTTAACCCTAATAATTCTCATGGTTTGTGCTGTAGTTTCCATTGGAGTAGGGATTACCACTGAACCATGGCCTGGGGGTATGTATGATGGTTTAGGAATCACATTTAGTGTATTTTTGGTAGTCATTGTTACTGCAGTTAGTGACTACCAACAATCCTTACAGTTCAGGGCTTTGGACAAGGAGAAGAAGAAAATCTTCGTCCATGTCATTAGAAATGGAAAAAGACAAAAGATTTCAATCTATGACGTGGTAGTAGGAGATATAGTTTATTTGTCAACTGGGGATCAAGTTCCAGCTGATGGGATTTACATATCTGGATACAACTTGTTGATTGATGAATCAAGCTTGACAGGTGAGAGTGAACCAGTAAATGTTCATGAAGAAGACAAACCATTTCTTCTTTCAGGAACCAAAGTGCAAGATGGTCAAGGGAAAATGTTAGTGACAAGCGTTGGCATGAGGACTGAATGGGGAAAACTAATGGAAACTTTGAACGAGGGGGAAGAACATGAGACCCCATTGCAAGTGAAACTGAATGGATTTGCTACAATTATTGGTAAAATTGGTTTAACTTTTGCAGTGCTGACATTTTTGGTGCTAACAATAAGGTTTGTGGGGGAAAAGGCAATTCATGGTGATATTACCAATTGGTCATCAAATGATGCAGTAAAGCTGCTAAACTTTTTTGCTATTTCTGTTACAATAATAGTTGTTGCAGTTCCAGAAGGATTACCTTTGGCAGTGACACTTAGTCTTGCTTTTGCAATGAAAGAATTAATGAATGAGAGAGCACTTGTGAGGCATCTTTCTGCGTGTGAGACAATGGGTTCAGCGAGTTCTATTTGCACAGATAAGACAGGTACATTAACCACTAACCATATGGCGGTTGATAAAATATGGATATGTGAAAAAGCCATGGAAATCAAAAGCAATATTGAAAGTGATGGAGTAGCCAAACTAAAACAAGAGATATCTGAAGGAGTTGTGAACGTCCTTTTGCAAGCTATATTTCAGAATACTTCTTCTGAAGTAGTTAAGGATAGAGATGGAAAGAATTCAATACTGGGAACACCAACAGAATCTGCATTATTGGAATTTGGCTTGCTTTTGGGTGGTGATTTTGATACCCAGCGCAGAGATTATAGGATACTTGAGATTGAGCCTTTTAATTCAGTTCGAAAGAAGATGTCTGTTCTTGTAGATCTTCCTGAAGGAGGAGGGACACGAGCTTTCTGCAAAGGGGCATCAGAGATAATATTAACAATGTGTGACAAATTTATTGACTGCAATGGAGAAACCATTGATCTTCTTGAAGACCAATCAAAGAATGTTTCAGAAGTTATAAACAATTTTGCCTCGGAAGCTTTAAGAACTCTTTGTTTGGCATTCAAAGACATAAATGAAAACCAAGGGAAAACGAGTATCCCTGATACTGGCTACACACTGATAGCTATTGTTGGAATCAAAGATCCTGTGCGCCCTGAGGTGAAGAAAGCTGTTCAAACTTGTCTAGAAGCCGGAACAACTGTTCGTATGGTCACTGGAGATAACATACATACAGCTAAGGCTATAGCTAAAGAATGTGGCATCCTCACGCAAGACGGTATAGCCATAGAAGGACCAGAATTTCGCAACTTGTCGCCTGAACAAATCAAGCATTTGATACCAAGAATCCAGGTCATGGCACGATCCTTGCCACTTGATAAGTATAACTTGGTGTCCCATTTGAGGAATACGTTTGGTGAAGTTGTTGCTGTTACCGGCGATGGAACCAACGATGCTCCGGCACTGCATGAAGCAGATATTGGACTTGCCATGGGCATCGCTGGAACAGAGGTTGCCAAACAAAATGCAGATGTGATTATTATGGATGATAACTTCAAGACAATTGTGAGAGTGGCCAGTTGGGGACGTGCAGTATACATGAACATTCAAAAATTTGTGCAGTTTCAGTTAACTGTTAATGTTGTTGCTCTTGTGATCAACTTTGTTTCTGCATGCATCACAGGATCTACACCACTAACACCTCTGCAATTACTATGGGTGAACATGATTATGGACACTCTAGGGGCTCTAGCCCTATCCACTGAGCCTCCTCATGAAGGGCTTATGAAAAGACCCCCAGTTTCAAAGCGGGCAAGTTTTATCACCAAAACCATGTGGAGGAACATCATTGGACAAAGTATATATCAGTTAATTGTCCTTGCCATTCTCAACTTTCAAGGCAAGAGGCTTCTCAGAATCACCGGTTCAGATGCCACTATTGTCCTCAACACTTTGATCTTCAACTCCTTTGTTTTTTGCCAGGTGTTCAATGAGATAAACAGCCGAGATATAGAAAAGATAAACGTGTTGAGAGGCATAATTAAGAGCTGGATATTTATAGGGATAATTTGCTCAACAGTGGGATTTCAAGTAATCATAGTGGAATTCCTGGGGAAACTTGCTAGCACAGTGCCTCTGAACTGGAAACTCTGGTTACTCAGTATCTTGATTGGAGCAATCAGCATGCCAATTTCTGCTATCGTCAAGTGCATCCCTGTTGAAAATTCATCACTACTCCAACATCATCATGATGGTTACCAGGAATTGCCTTCTGATCCCCACCAGCTAGCATAG 3291 0.4126 MSRALVQATKAPQPCCHCHLCIIIGAFHSGLLLVNLSALQCKNESGGFKSLDWQCGSYQEMESLLKDFVIEHKRPSIEASKRWRSAVALVKNHRRRFRMVPDLQKRSEAQQTMKQIQDKVRVALFVQKAALHFISAGCQLPEEVREAGFGIDPEVVASIVRGHDHEALKKYGGVKEIAMKLSTSVDKGINEDSAYTRQQVYGFNRYTEKPPRSFLLFVWEALHDLTLIILMVCAVVSIGVGITTEPWPGGMYDGLGITFSVFLVVIVTAVSDYQQSLQFRALDKEKKKIFVHVIRNGKRQKISIYDVVVGDIVYLSTGDQVPADGIYISGYNLLIDESSLTGESEPVNVHEEDKPFLLSGTKVQDGQGKMLVTSVGMRTEWGKLMETLNEGEEHETPLQVKLNGFATIIGKIGLTFAVLTFLVLTIRFVGEKAIHGDITNWSSNDAVKLLNFFAISVTIIVVAVPEGLPLAVTLSLAFAMKELMNERALVRHLSACETMGSASSICTDKTGTLTTNHMAVDKIWICEKAMEIKSNIESDGVAKLKQEISEGVVNVLLQAIFQNTSSEVVKDRDGKNSILGTPTESALLEFGLLLGGDFDTQRRDYRILEIEPFNSVRKKMSVLVDLPEGGGTRAFCKGASEIILTMCDKFIDCNGETIDLLEDQSKNVSEVINNFASEALRTLCLAFKDINENQGKTSIPDTGYTLIAIVGIKDPVRPEVKKAVQTCLEAGTTVRMVTGDNIHTAKAIAKECGILTQDGIAIEGPEFRNLSPEQIKHLIPRIQVMARSLPLDKYNLVSHLRNTFGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKQNADVIIMDDNFKTIVRVASWGRAVYMNIQKFVQFQLTVNVVALVINFVSACITGSTPLTPLQLLWVNMIMDTLGALALSTEPPHEGLMKRPPVSKRASFITKTMWRNIIGQSIYQLIVLAILNFQGKRLLRITGSDATIVLNTLIFNSFVFCQVFNEINSRDIEKINVLRGIIKSWIFIGIICSTVGFQVIIVEFLGKLASTVPLNWKLWLLSILIGAISMPISAIVKCIPVENSSLLQHHHDGYQELPSDPHQLA 1096
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0699 1096 Gene3D - 516 715 IPR023299 GO:0000166
Lele06g0699 1096 SFLD C1.7: P-type atpase like 488 863 - -
Lele06g0699 1096 FunFam Calcium-transporting ATPase 75 135 - -
Lele06g0699 1096 CDD P-type_ATPase_Ca_PMCA-like 197 944 - -
Lele06g0699 1096 SUPERFAMILY Calcium ATPase, transduction domain A 290 387 IPR008250 -
Lele06g0699 1096 SUPERFAMILY Calcium ATPase, transmembrane domain M 172 1072 IPR023298 -
Lele06g0699 1096 Pfam E1-E2 ATPase 290 485 - -
Lele06g0699 1096 PRINTS P-type cation-transporting ATPase superfamily signature 811 830 - -
Lele06g0699 1096 PRINTS P-type cation-transporting ATPase superfamily signature 730 740 - -
Lele06g0699 1096 PRINTS P-type cation-transporting ATPase superfamily signature 708 719 - -
Lele06g0699 1096 PRINTS P-type cation-transporting ATPase superfamily signature 835 847 - -
Lele06g0699 1096 PRINTS P-type cation-transporting ATPase superfamily signature 336 350 - -
Lele06g0699 1096 PRINTS P-type cation-transporting ATPase superfamily signature 506 520 - -
Lele06g0699 1096 FunFam Calcium-transporting ATPase 828 1074 - -
Lele06g0699 1096 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 512 720 IPR023299 GO:0000166
Lele06g0699 1096 Pfam Cation transporting ATPase, C-terminus 896 1069 IPR006068 -
Lele06g0699 1096 SFLD p-type atpase 488 863 IPR044492 -
Lele06g0699 1096 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 781 900 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele06g0699 1096 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 446 573 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele06g0699 1096 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 257 429 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele06g0699 1096 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 607 756 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele06g0699 1096 ProSitePatterns E1-E2 ATPases phosphorylation site. 508 514 IPR018303 -
Lele06g0699 1096 Gene3D - 220 1070 - -
Lele06g0699 1096 Gene3D - 503 856 IPR023214 -
Lele06g0699 1096 SUPERFAMILY HAD-like 505 916 IPR036412 -
Lele06g0699 1096 SMART Cation_ATPase_N_a_2 173 242 IPR004014 -
Lele06g0699 1096 Pfam Ca2+-ATPase N terminal autoinhibitory domain 66 108 IPR024750 GO:0005516
Lele06g0699 1096 Pfam Cation transport ATPase (P-type) 565 649 - -
Lele06g0699 1096 FunFam Calcium-transporting ATPase 708 856 - -
Lele06g0699 1096 Gene3D - 187 389 - -
Lele06g0699 1096 PANTHER CATION TRANSPORTING ATPASE 117 1072 - -
Lele06g0699 1096 PRINTS H+-transporting ATPase (proton pump) signature 668 686 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele06g0699 1096 PRINTS H+-transporting ATPase (proton pump) signature 843 868 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele06g0699 1096 PRINTS H+-transporting ATPase (proton pump) signature 811 827 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele06g0699 1096 Gene3D - 75 135 - -
Lele06g0699 1096 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 166 1073 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Lele06g0699 1096 FunFam Calcium-transporting ATPase 516 715 - -
Lele06g0699 1096 Pfam Cation transporter/ATPase, N-terminus 172 237 IPR004014 -
Lele06g0699 1096 FunFam Calcium-transporting ATPase 267 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0699 Lele-ChrLele06 4272297 4280688 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0699 116 1096 Primary Pumps ATPases AT3G57330 69.137 0.0 1397