Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0667 ATGGCTTGCGAGTCCCAATTTCACGTGTTGGCCGTCGACGACAGCATAATCGATCGGAAGTTTATTGAGAGGCTCCTCAAAACCTCCTCCTATCAAGTTACCACCGTGGATTCCGGTAGCAAGGCTTTAGAGTTTCTGGGTTTGCGTGACAATGATCAGACCGACCCTAATCCACCTTCCGTGTCTCCTCACGGTAATCAGGAAGTGAATGTGAACCTTGTTATTACAGACTACTGTATGCCTGGCATGACTGGCTATGATTTACTCAAGAAAATCAAGGAATCTTCGTCTTTGAGAAACATACCAGTGGTGATCATGTCATCCGAAAATGTGCCTTCCAGGATTAGCAAATGCTTAGAAGAAGGAGCAGAGGAATTTTTCTTGAAACCAGTGAAGCCAGCAGATCTGAACAGGCTTAGACCCCATATGATGAAGACCCAGAAATTGAAGGATCAAGCTCAAATAAGAGATGAAAAGCTTGAAACCCCAGAGATTCAACAAGCACCACAATCACTAGTAGAACAACAACAACAACAACAACAACATCAACAGTCAGTACAGATAATCAATACTAACAAGAGGAAAACCGTGGAAGAGGGGCTTTCGCTTGAAACTGAGAGAACAAGAACAAGATTCAACGGCATAGCCACTATGGTCTGA 660 0.4379 MACESQFHVLAVDDSIIDRKFIERLLKTSSYQVTTVDSGSKALEFLGLRDNDQTDPNPPSVSPHGNQEVNVNLVITDYCMPGMTGYDLLKKIKESSSLRNIPVVIMSSENVPSRISKCLEEGAEEFFLKPVKPADLNRLRPHMMKTQKLKDQAQIRDEKLETPEIQQAPQSLVEQQQQQQQHQQSVQIINTNKRKTVEEGLSLETERTRTRFNGIATMV 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0667 219 ProSiteProfiles Response regulatory domain profile. 8 144 IPR001789 GO:0000160
Lele06g0667 219 Pfam Response regulator receiver domain 9 137 IPR001789 GO:0000160
Lele06g0667 219 SUPERFAMILY CheY-like 6 161 IPR011006 -
Lele06g0667 219 CDD REC_typeA_ARR 9 139 - -
Lele06g0667 219 Gene3D - 8 214 - -
Lele06g0667 219 PANTHER TWO-COMPONENT RESPONSE REGULATOR 7 193 IPR045279 GO:0009736
Lele06g0667 219 SMART REC_2 7 140 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0667 Lele-ChrLele06 3993793 3995123 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0667 1 219 Response Regulator Gene Family AT3G57040 62.083 7.79e-92 267
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lele06g0667 Response_reg 7e-20 CL0304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0667 06 3993793 3995123 Lele06g0667 06 3993793 3995123 ECH
Lele06g0667 06 3993793 3995123 Lele07g0855 07 4950788 4952056 hybridization
Lele06g0667 06 3993793 3995123 Lele08g0662 08 4036244 4039097 hybridization