Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0639 ATGACTTCATCGTGTCCACCGTTGACCAAATGTTGCATCAAGCCGAACCTTTCTCTGTTACGCTTTAGCGACTCGATGCCTGATTCTTTTCGTTCCTTCTCCCATGGAGCTATAGTCTTGTCCCTTGTTCCACATAGATACTCATCCTCACCGTCACTGGTCAAGCCAATGGCCAGAGTTAACAGCAAAAGACAAAAGATTATTGACCAAAGGAAAAGGATCATTGACAATGACGATGTAACTCATGACAGCGATACTGTATTTAATTCTGGTGAATTCCCAAAAAGTGTTTGTAACATCAGAACAATAATAAGAATTACCATTCAAATGCAGCTTCCTATATTTAGCCACGTGCTCTCTTGCTCACCATACAAGATGTTCCCATTAATTTACCTAGGATACATATCACTAAATTCTACTCCATTGAAATTTAAGCAAGATATCAAATGCCAAGTGCCAACTGGCACTCCCCCACTTTACACCCTTCCTCTTCTGCTTATAAAAGGAGAAGCCTTGCCAAGTCTCAGCACATACCAGCTCTCTCAATTCTCAAGTCTTGCTCTATATACACAGCTCTCTTCAACATTCTTCCCATTCTCCAGAATGGCATCGAGCTCAATGTCATCCTCTGGTTCATGGAGTGCCCAGGAGAACAAAGCCTTCGAAAGGGCTCTTGCAGTTTACGACAAGGACACTCCTGATCGTTGGTACAATGTTGCCAGGGCTGTTGGTGGGAAGACACCAGAGGAGGTGAAGAGGCACTATGAGATGCTCGTCCGAGACATTCAGTACATAGAATCTGGGAGAGTGCCCTTCCCCAATTACAAGAAAACTGCAGCCTTTGATGACCAAAAAAGGCTCAGAAACCTGCAGCTCCAGTGA 882 0.4399 MTSSCPPLTKCCIKPNLSLLRFSDSMPDSFRSFSHGAIVLSLVPHRYSSSPSLVKPMARVNSKRQKIIDQRKRIIDNDDVTHDSDTVFNSGEFPKSVCNIRTIIRITIQMQLPIFSHVLSCSPYKMFPLIYLGYISLNSTPLKFKQDIKCQVPTGTPPLYTLPLLLIKGEALPSLSTYQLSQFSSLALYTQLSSTFFPFSRMASSSMSSSGSWSAQENKAFERALAVYDKDTPDRWYNVARAVGGKTPEEVKRHYEMLVRDIQYIESGRVPFPNYKKTAAFDDQKRLRNLQLQ 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0639 293 SUPERFAMILY Homeodomain-like 206 261 IPR009057 -
Lele06g0639 293 ProSiteProfiles SANT domain profile. 208 263 IPR017884 -
Lele06g0639 293 ProSiteProfiles Myb-like domain profile. 205 259 IPR001005 -
Lele06g0639 293 FunFam Transcription factor SRM1 205 272 - -
Lele06g0639 293 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 202 283 IPR044636 GO:0003700
Lele06g0639 293 SMART sant 209 261 IPR001005 -
Lele06g0639 293 CDD SANT 216 259 IPR001005 -
Lele06g0639 293 Pfam Myb-like DNA-binding domain 211 257 IPR001005 -
Lele06g0639 293 Gene3D - 203 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0639 Lele-ChrLele06 3811449 3814398 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele06g0639 Myb_DNA-binding 5.4e-06 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0639 06 3811449 3814398 Lele08g0637 08 3852192 3854287 hybridization