Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0634 ATGGTGCCCGCCATCGCATCCAAAAACAAAAGCAGTGAAGATTTCGCTTCCCATTCAGCATCATTTGCTGGTCATTCTCGCTGCCACTCGTTCTCGCAAGATGTGAGTGAAGATGTACTTATCCTTTCTCGGGAAGAAGCTTCAAAAATATTCCCGTCTTTCATTGGCAAATCTGCTTTTGTTGGCGATATCAGTGCCGTGGAGCTGAAATCCAAAGGCTGTAAAATTTGGCTTTCTGAGCCTTCCATGGTTTCTTCTTCCCTTGCCCCTGGTTCCATTGTGTCGGTGTCAATTGCATCTTCAAGAAAGAAAAATGTTCATTCAGATAGCTTTCCTCTAAGATCACTAACAAAAGAATGTGCCCGATGCTATGGACTGTATGCTGGGAACGCTTTAGATGATGGTGCAGGAAACTACTTTACTCTTGCAACAGTTTTTCCTTCTAGCAAGGTTTTGAAGAATGGAGTACAAATTTCATCAGAGCTTTCTTATACCATGGGGTGTCCTACTTTTGGCACACATGTGTTCATTTATCCAGTGCAGAATCAATGCCTATCTTCTCTTATAAATGAGAAAAATCCACATTCTGAAGATAATAGCCTGGTGGCGTATGATTGCGAGGAATTGTATCTTCAGTTGGCTCCTTTGAAGAATGGATTACCAATGGACTTGTCTGCAACAAAATCCCATCTTCAATTTGGGAATGAAAATGTTACTTCTCCTAAAACACCTAATGGATCGAAATTGTCTAGTTTGAGTGATTTATCTTCACCTATATTTGAAGATTTTTCTAACGTACCTAATCAAGAGAGCCAATCACTAATTTCATTTGATCTAAGGGAGGCATTGGGGGATGAAAGGTCCAAAAAACTACTGCAGACATGCGCAGCATCATGGTTGTATTCCCGTTGGTTACTAATAGGGAATATTGTGAGCATACAAATATTTTCGGAGCTATGCATTTTCCAAGTAATAGGAGCTAAAAGGGTGTCAGTAGACCGATGTACTCCTGATTTATCAAGTGAAATTAGTTCTTCATACCCAGAGGTTTCTGACATTTCAGAGCATATAAATCAGGCTATCATTGTCAACCGTGAAACAAAGGTATCTTTATCTTTGCCATCAAATACGACTTCTGATGAGCTGATTCAAAGAGATTTTTCTAAGGCAGAACTCAGGGAGAAGGGCACTAAGGGTAGTGTACCTAGTAATATTTCAAAATTGGGTGGTCTTTCTAAAGAATATGCAGTTTTGAAGGATATTATTTTGTCTTCAGTAAAAAATGATCTATTAAGTAACCTTGGGTTACGAACTACAAAAGGCGTCCTTCTTCATGGTCCCCCTGGCACAGGAAAAACTTCCTTAGCTCAATTATGTGCTCATGATGTGGGGGTCAATCTTTTCCGAATAAATGGACCTGAAATTGTTGGCCAATATTATGGTGAAAGTGAGCAAGCATTGCACGAAGTTTTTGATTCGGCCATTCAGGCTGCCCCTGCTGTGGTTGGATCTTATCACAAAGGAAAAGTTTTTGTTATCCAACAGGGGTCTTTAGTGCCAATTGATGAATCTTCAAAACTAATTGCCGAAAATCTATCCAAACCTGCTTGTAATCTTAGCTTATGCATATGTTGCAAATATAGGCATATAAGTTGTGAATTTGAGGTATTTATTGATGAGCTGGATGCTATTGCCCCTGCAAGGAAAGATGGCGGTGATGAGCTTTCTCAGAGGATGGTTGCTGCCTTATTGAATCTTATGGATGGAATTTGTAGAACTGAAGGATTGCTTGTTATTGCTGCCACCAACAGGCCTGACAATATTGAGCCTGCTCTGAGGCGGCCTGGAAGATTTGACAGGGAAATTGAAATTGGTGTGCCATCTCCTCACCAACGATTGGATATGTTGCTCACTCTTCTCAGTGAAGTGGATCACACTCTTTCAGAGATACAAATTGAACATCTCGCCACAGTCACACATGGTTTTGTGGGTGCTGATCTAGTTGCCCTTTGCAAAGAGGCGGGCTTGGTTTGTCTTAGGCGTTATTTTAATTTTAAGAAAGATTGGCATAATTGCTGCTATGATGGAACATCCTCACAATATAAAGGTCAGCAACCTGCATTGCTCAAAGACTCAGAAGACTCAAGAGATCATTCACGGCATTCAGCTTCATCTGTTTCGGAGTTATCAGTGGCTTCAAACTCTTTGATACCTTCTTGCATGATAGGTTCAACTTCTGACCATATGGAAATGGTTCCTGATACTATTGAAGATCGTAATTTGAAAGTAACTTGTGAAGATTTCCAGAAGGCAAGAATGATAATAAGACCCAGTGCCATGAGAGAGGTAATCCTGGAGGTTCCCAAGGTTAAGTGGGAAGATGTTGGTGGCCAGAAAGATGTCAAAGCCCAGCTTATGGAAGCAGTAGAATGGCCCCAGAAGCACCATGATGCATTGAAGCGTATTGGGACTCACCCTCCTAAAGGCGTGTTGATGTTTGGCCCTCCAGGTTGTAGCAAAACTCTCATGGCACGTGCAGTTGCTTCTGAAGCAGCATTGAACTTTCTGGCTGTTAAGGGTCCGGAACTCTTCAGCAAATGGGTTGGTGAATCTGAGAAGGCTGTCAAATCTTTGTTTGCAAAAGCAAGGGCGAATGCCCCATCTATTGTTTTCTTTGATGAAATAGATGGCCTTGCTGTCACTCGGGGGAAGGAAAGTGATGGTGTTTCAGTGTCAGACAGAGTCATGAGTCAACTTCTTGTTGAACTGGATGGTCTGCATGAAAGAGCTAATGTCACTGTCATTGCTGCTACAAATAGGCCAGACAAGATTGATCCTGCCCTTTTAAGACCAGGACGCTTTGACCGTCTACTGTACGTGGGACCTCCAAATGAGATAGACAGAGAAGAAATATTCCACATCCACTTGCATAATATCCCGTGTGGTTATGATGTAAGCCTAAAAGAACTGGCTTCTCTTACAGACGGTTGTACTGGTGCTGATATTTCACTAATATGCCGGGAGGCAGCTGTTGCTGCTATTGAGGAGAGTCTTAATGCTTCTGTGATAACAATGAAGCATTTGAAGACCGCAATTAAGCAGGTCCAGCCAACAGAGATTCAGTCTTACCAACAGTTGTCAGCTAAATTTCAAAGGGCTGTAGGCACCTGTGATGGAAAACATGAGGGCAGCAATATGCAGTGTTCAAGCAGATCTACTTGGCCTGGGTAA 3231 0.4197 MVPAIASKNKSSEDFASHSASFAGHSRCHSFSQDVSEDVLILSREEASKIFPSFIGKSAFVGDISAVELKSKGCKIWLSEPSMVSSSLAPGSIVSVSIASSRKKNVHSDSFPLRSLTKECARCYGLYAGNALDDGAGNYFTLATVFPSSKVLKNGVQISSELSYTMGCPTFGTHVFIYPVQNQCLSSLINEKNPHSEDNSLVAYDCEELYLQLAPLKNGLPMDLSATKSHLQFGNENVTSPKTPNGSKLSSLSDLSSPIFEDFSNVPNQESQSLISFDLREALGDERSKKLLQTCAASWLYSRWLLIGNIVSIQIFSELCIFQVIGAKRVSVDRCTPDLSSEISSSYPEVSDISEHINQAIIVNRETKVSLSLPSNTTSDELIQRDFSKAELREKGTKGSVPSNISKLGGLSKEYAVLKDIILSSVKNDLLSNLGLRTTKGVLLHGPPGTGKTSLAQLCAHDVGVNLFRINGPEIVGQYYGESEQALHEVFDSAIQAAPAVVGSYHKGKVFVIQQGSLVPIDESSKLIAENLSKPACNLSLCICCKYRHISCEFEVFIDELDAIAPARKDGGDELSQRMVAALLNLMDGICRTEGLLVIAATNRPDNIEPALRRPGRFDREIEIGVPSPHQRLDMLLTLLSEVDHTLSEIQIEHLATVTHGFVGADLVALCKEAGLVCLRRYFNFKKDWHNCCYDGTSSQYKGQQPALLKDSEDSRDHSRHSASSVSELSVASNSLIPSCMIGSTSDHMEMVPDTIEDRNLKVTCEDFQKARMIIRPSAMREVILEVPKVKWEDVGGQKDVKAQLMEAVEWPQKHHDALKRIGTHPPKGVLMFGPPGCSKTLMARAVASEAALNFLAVKGPELFSKWVGESEKAVKSLFAKARANAPSIVFFDEIDGLAVTRGKESDGVSVSDRVMSQLLVELDGLHERANVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNEIDREEIFHIHLHNIPCGYDVSLKELASLTDGCTGADISLICREAAVAAIEESLNASVITMKHLKTAIKQVQPTEIQSYQQLSAKFQRAVGTCDGKHEGSNMQCSSRSTWPG 1076
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0634 1076 CDD AAA 815 962 - -
Lele06g0634 1076 Pfam AAA+ lid domain 650 683 IPR041569 -
Lele06g0634 1076 Pfam AAA+ lid domain 984 1029 IPR041569 -
Lele06g0634 1076 Gene3D - 627 790 - -
Lele06g0634 1076 MobiDBLite consensus disorder prediction 699 727 - -
Lele06g0634 1076 CDD AAA 426 625 - -
Lele06g0634 1076 Gene3D - 791 1037 IPR027417 -
Lele06g0634 1076 MobiDBLite consensus disorder prediction 709 723 - -
Lele06g0634 1076 ProSitePatterns AAA-protein family signature. 932 950 IPR003960 GO:0005524|GO:0016887
Lele06g0634 1076 Gene3D - 963 1033 - -
Lele06g0634 1076 FunFam Calmodulin-interacting protein 111 627 790 - -
Lele06g0634 1076 PANTHER AAA-FAMILY ATPASE 79 1051 - -
Lele06g0634 1076 Pfam ATPase family associated with various cellular activities (AAA) 830 961 IPR003959 GO:0005524|GO:0016887
Lele06g0634 1076 Pfam ATPase family associated with various cellular activities (AAA) 556 625 IPR003959 GO:0005524|GO:0016887
Lele06g0634 1076 Pfam ATPase family associated with various cellular activities (AAA) 442 502 IPR003959 GO:0005524|GO:0016887
Lele06g0634 1076 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 788 1039 IPR027417 -
Lele06g0634 1076 FunFam calmodulin-interacting protein 111 isoform X1 787 962 - -
Lele06g0634 1076 FunFam spermatogenesis-associated protein 5-like protein 1 963 1045 - -
Lele06g0634 1076 Gene3D - 386 625 IPR027417 -
Lele06g0634 1076 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 405 681 IPR027417 -
Lele06g0634 1076 SMART AAA_5 826 964 IPR003593 -
Lele06g0634 1076 SMART AAA_5 438 628 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0634 Lele-ChrLele06 3771557 3779835 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0634 32 1074 Calmodulin-binding Proteins AT3G56690 53.283 0.0 954