Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0620 ATGTTCCTCCTTCCTCGTATTCTCTTTTATCTCCAATTGCCAGAGGCAAACCCTGTTGCAGTTTTATGCTTTTTGTCGTTTCTCAATACTTATGCATTAGCCAACGAACTCCTTACAGGTGTTGTACCATATACGGATCTTCGAGCAGAAGCACAGGCTCACACGGTACTGGAGATGAACTATACAGAGCAGCAATTAACAGCAGCTGTTGTTTCTGATGGATTAAGACCAGTCCTTGCTGCTCAGAAGTCTGGTGTACCTTCAAGATTATTAGCATTAATACAGAGATGCTGGGATTCAAAACCTGAAAATAGACCTTCCTTTGATGACATAGTTAAGGAGCTTCATTCCATCATTGAGCACAGAAGCGACGTTGACGATAGCAGACACCTCAGACCTTGTAAGTTGCATGATAATCACCTTCGGGCTTATCAAGAGAGTATTAACTGGTCTACCTTGGGAGAACTTTTCTCAAAGAGATCCTCCAGTGCAACTGATTCTAAATTGAGAAACTGGCATAAGTCTTTTGATGAGCCTTTGGCTCACTGTCCAGCACTTTCTTGGGGATCTTATGCTACCTGTGGCAGAAGGGAGACCATGGAGGACACACATTTCATTCTTCCCAGCATCTGCAATGAAAAGGACATACATGCTTTTGGTATCTTTGATGGTCATAGAGGTACAGCAGCCGCTGAGTTTTCTGCTCAAGCCATGCCAGGATTCCTGCAAGATTTAGGTTCTATAGGGAGTCCAGCTAGCACATTGGTTGAGGCATTCCTTAAAACAGATGTTGCCTTCAGAGAAGAGCTTGATTCCTGTCGTAAATCCAGAAGAGTTACCCAGAAGGATTGGCATCCAGGTTGCACAGCGGTCGCCGCTCTTGTGGTCAGAAACAAGCTTTTTGTTGCTAACAGTGGCGATTGCAGGGCAATCTTATGCCGGGCTGGTTCTCCCATTGCTCTAAGCAGAGTTACTCGTTCCATTGGGGACGACGATCTGAAGCCGGCTGTAACTGCAGAACCCGAGATAACTGAAACTACTTTATCCGCAGACGATGAATACTTGGTGATGGCGAGTGATGGGCCGTGGGATGTGATGAACAATAAAGAAGTGATAAGCATAATCAAAGATACAGTGAAAGAACCAGGAATGTGTTCCAAGAGATTGGCTACTGAGGCAGTGGAACGGGGAAGCAGGGATAACATAAAGGTCATTGTGGTTTTCTTGCGCCCTGTGTCTACAGCAGAGAGAATTTATTAG 1260 0.45 MFLLPRILFYLQLPEANPVAVLCFLSFLNTYALANELLTGVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSDGLRPVLAAQKSGVPSRLLALIQRCWDSKPENRPSFDDIVKELHSIIEHRSDVDDSRHLRPCKLHDNHLRAYQESINWSTLGELFSKRSSSATDSKLRNWHKSFDEPLAHCPALSWGSYATCGRRETMEDTHFILPSICNEKDIHAFGIFDGHRGTAAAEFSAQAMPGFLQDLGSIGSPASTLVEAFLKTDVAFREELDSCRKSRRVTQKDWHPGCTAVAALVVRNKLFVANSGDCRAILCRAGSPIALSRVTRSIGDDDLKPAVTAEPEITETTLSADDEYLVMASDGPWDVMNNKEVISIIKDTVKEPGMCSKRLATEAVERGSRDNIKVIVVFLRPVSTAERIY 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0620 419 ProSiteProfiles PPM-type phosphatase domain profile. 187 409 IPR001932 -
Lele06g0620 419 Pfam Protein phosphatase 2C 192 322 IPR001932 -
Lele06g0620 419 Pfam Protein phosphatase 2C 324 402 IPR001932 -
Lele06g0620 419 SUPERFAMILY Protein kinase-like (PK-like) 35 120 IPR011009 -
Lele06g0620 419 SUPERFAMILY PP2C-like 182 411 IPR036457 -
Lele06g0620 419 SMART PP2C_4 177 407 IPR001932 -
Lele06g0620 419 PANTHER PROTEIN PHOSPHATASE 324 407 - -
Lele06g0620 419 Gene3D Transferase(Phosphotransferase) domain 1 31 122 - -
Lele06g0620 419 Gene3D - 324 417 IPR036457 -
Lele06g0620 419 CDD PP2Cc 189 409 IPR001932 -
Lele06g0620 419 SMART PP2C_SIG_2 202 409 IPR001932 -
Lele06g0620 419 Gene3D - 181 323 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0620 Lele-ChrLele06 3716551 3720846 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0620 33 419 PP2C-type Phosphatase Gene Family AT2G40860 59.132 3.08e-174 497
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-3 Lele06g0620 PP2C 1.6e-23 CL0238