Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0614 ATGTCAAATAGCAGAAACACTCATTGGTGTTATAGTTGCAGGAGGCCAGTTCAGCTGCGGGGGCGAGATGGGGTTTGCCCTAATTGTAATGAGGGGTTTGTTCAAGAACTTAATGATATGGTCATCAACCCGCTAGAATTATTTGGACTTGAAGAACGTGACCGGAGGTTCAGAATTATGGAAGCCTTCTCTGCCTTTATGAGGCATCGACCGGTAAATAGAAGCCATAGGCATGACATTATAGTTGGATCAGATTCAATTCCTGAAAATGGTCCAGGGTATGCTCCTTTGCTTCTCTTTGGTGGCCAGATTCCTGTCAGATTGTCTGGACATGGTGGATTCGAGTCTCTTTTCAATGGGACTCCTGGAATTGGTCTAATGCAAAGCAATACAGGTGACTATTTTATTGGTCCCGGACTGGAGGAACTGTTTGAGCAGCTTTCAGCTAATGACAGGCGAGGTCCTCCTCCGGCTTCCAGGTCCTCTATAGATGCAATGCCTACTATTAAGATCACACATAAGCTTCTTCGGTCAGACTCACATTGTCCAGTATGCCAAGATAAGTTTGAGCTGGGGGCTGAAGCAAGGCAAATGCCATGTAAGCATATATATCACTCAGATTGTATTGTACCCTGGTTGGTACAGCATAACTCCTGCCCTGTTTGTCGCCAGGAGCTGCCACCACAAGGATTGAGTGGCAACCGTGGCTCCAATGGTAGAACTAGAAGCAGTTCTGATAGTAATAATGGTAATGGAAGGGTAAGTGGTAGAGAGAACCAGGGAAGACGGAACCCATTCTCCTATTTTTGGCCGTTCCGTTCATCTAATTCGAACAACAATGGAGCAGGGGGAAGCAGCTCACCAACACCGCCTATCCCTGAGAATAGCCACCACACCGGCTATTCCGGATGGCCATTTGATCAGGGTTCTGCTGTTTTGAAGGTGTGA 948 0.4684 MSNSRNTHWCYSCRRPVQLRGRDGVCPNCNEGFVQELNDMVINPLELFGLEERDRRFRIMEAFSAFMRHRPVNRSHRHDIIVGSDSIPENGPGYAPLLLFGGQIPVRLSGHGGFESLFNGTPGIGLMQSNTGDYFIGPGLEELFEQLSANDRRGPPPASRSSIDAMPTIKITHKLLRSDSHCPVCQDKFELGAEARQMPCKHIYHSDCIVPWLVQHNSCPVCRQELPPQGLSGNRGSNGRTRSSSDSNNGNGRVSGRENQGRRNPFSYFWPFRSSNSNNNGAGGSSSPTPPIPENSHHTGYSGWPFDQGSAVLKV 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0614 315 MobiDBLite consensus disorder prediction 228 315 - -
Lele06g0614 315 FunFam E3 ubiquitin-protein ligase RING1-like 145 229 - -
Lele06g0614 315 Pfam Ring finger domain 181 223 IPR001841 -
Lele06g0614 315 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 122 227 - -
Lele06g0614 315 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 144 229 IPR013083 -
Lele06g0614 315 MobiDBLite consensus disorder prediction 230 262 - -
Lele06g0614 315 Pfam zinc-ribbon 6 37 IPR039525 GO:0061630
Lele06g0614 315 SUPERFAMILY RING/U-box 162 229 - -
Lele06g0614 315 SMART ring_2 182 222 IPR001841 -
Lele06g0614 315 CDD RING-H2_RNF126_like 182 223 - -
Lele06g0614 315 ProSiteProfiles Zinc finger RING-type profile. 182 223 IPR001841 -
Lele06g0614 315 MobiDBLite consensus disorder prediction 269 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0614 Lele-ChrLele06 3686327 3687350 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0614 111 227 C3H Transcription Factor Family AT5G01980 41.322 1.18e-25 104