Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0567 ATGGGAAGGCCTCCTTGCTGTGAGAAAATTGGCATCAAGAAGGGTCCATGGACACCTGAGGAGGACATCATTCTTGTTTCTTACATCCAAGAACATGGTCCGGGAAATTGGAGATCAGTTCCTACTAATACTGGGTTGTCAAGGTGCAGCAAAAGTTGCAGGCTTAGATGGACGAACTACCTCAGGCCAGGAATCAAGAGGGGAAACTTCACTCCCCATGAGGAAGGAATGATAATTCATTTGCAAGCTCTCCTGGGTAACAAATGGGCAGCCATAGCTTCGTACCTTCCTCAAAGGACAGATAACGATATAAAGAACTATTGGAACACGCATCTGAAGAAGAAGCTGAAAAAATTTCAAACAGGATTGGACCCCCACCTGGCAGCGAACTCCACAACAACAACTAGTCAGTTTGCTTCAAAAAGCTTTAATGAGAGAGAGAATTTAGATATGATGGGCAATAACCATGGCTCGTCTCAAAGGTTAAGTCAGTCTCAATCATCCCCCTATGCATCCAGCACCGAGAACATATCTCGCCTCTTAGAAGGTTGGATGAGATCCTCCCCAAAGCCAGGCACAAGTAGTAATAATCTTCTCAAAGCAACAACCCAAGATCACAAGGAGCTTCAGAGAAACATCGAAAATAGCCGTAACATGGTGAAGTCTGCTCTAAGTTTGATGTCCAACAAAAACAAAGACGAGCGAGAAGATCAGGGTGATGGTGGTGATATGATGTCCCGTGAAGAGTTTGATTCCATTTTGTCTTATGAGAACCTTAATAATGCTGCTTGGGACAAGTCCACTGGCGATTCTATGCCTCCAACCCAGAAGATTTCTGAAACTATTTTTGTTGATAATGATGAAGACAAGGTTCGTGTTATGGCTCATGATGAGAGGAATAAGCAAAGATATGAGAACGGTGCTGCTGATCCTCCATTGTCAGTTCTTGAGAAGTGGCTCTTAGATGAAAATGCTGGTCAAGTAGAGGAGGTGATGGAATTATCCCTTACTTTCTAA 1017 0.4356 MGRPPCCEKIGIKKGPWTPEEDIILVSYIQEHGPGNWRSVPTNTGLSRCSKSCRLRWTNYLRPGIKRGNFTPHEEGMIIHLQALLGNKWAAIASYLPQRTDNDIKNYWNTHLKKKLKKFQTGLDPHLAANSTTTTSQFASKSFNERENLDMMGNNHGSSQRLSQSQSSPYASSTENISRLLEGWMRSSPKPGTSSNNLLKATTQDHKELQRNIENSRNMVKSALSLMSNKNKDEREDQGDGGDMMSREEFDSILSYENLNNAAWDKSTGDSMPPTQKISETIFVDNDEDKVRVMAHDERNKQRYENGAADPPLSVLEKWLLDENAGQVEEVMELSLTF 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0567 338 MobiDBLite consensus disorder prediction 228 246 - -
Lele06g0567 338 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
Lele06g0567 338 Gene3D - 13 66 - -
Lele06g0567 338 FunFam MYB-related transcription factor 13 66 - -
Lele06g0567 338 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Lele06g0567 338 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Lele06g0567 338 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Lele06g0567 338 FunFam Transcription factor MYB60 68 138 - -
Lele06g0567 338 MobiDBLite consensus disorder prediction 148 175 - -
Lele06g0567 338 MobiDBLite consensus disorder prediction 227 246 - -
Lele06g0567 338 SMART sant 66 114 IPR001005 -
Lele06g0567 338 SMART sant 13 63 IPR001005 -
Lele06g0567 338 Gene3D - 69 146 - -
Lele06g0567 338 Coils Coil 199 226 - -
Lele06g0567 338 CDD SANT 16 61 IPR001005 -
Lele06g0567 338 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Lele06g0567 338 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Lele06g0567 338 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 233 - -
Lele06g0567 338 CDD SANT 69 112 IPR001005 -
Lele06g0567 338 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0567 Lele-ChrLele06 3418659 3420067 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0567 1 145 MYB Transcription Factor Family AT5G62470 79.452 3.93e-83 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele06g0567 Myb_DNA-binding 1.7e-15 CL0123