Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0562 ATGAGTTTTCATCACTTCATAAATGGAGGCGACGGTTTCCGCGTGGCTATAAAACAATTACCCTCCACTCCTCTTCTAGTTCCCCAGCCCCCACTCTCTACCATTTTTGTGGCCATGGGTGGTCATCCCGGTGAGATCGAGTCTTACAAATCTGAGATTGGATTTCAGATTCTGAACCCTTCCTTCATGGGGTCCAGAGCGGCCGAAAAAAGCGTCGGTGAAGTCGACTACCATTTCCTGGTCGAGACGGACGGCATGTCCTTGAAACTGAGTGAAGAAGCCGAAGCTAAGAGGCCGGATGCCGGCAAGAGTGGCTACACGAAGCTCTGTGCCAGAGGCCACTGGAGGCCCGGTGAAGATGCCAAGCTCAAAGAGCTGGTTGCTCAGTATGGTCCTCAAAACTGGAACTTGATCGCCGAGCATCTCCAAGGACGATCAGGTAAGAGTTGCAGATTGAGGTGGTTTAACCAGCTGGATCCTAGGATTAACAGGAGGGCTTTCTCCGAGGAAGAAGAGGAGAGGCTGTTGGGCGCTCATAAGGCGTACGGTAACAAGTGGGCTCTGATTGCGAGGCTGTTCCCGGGGAGGACCGATAATGCGGTGAAGAACCACTGGCACGTGATCGTGGCGAGGAGGCAGAGAGAACAGTCACACGTTTTCAGAAGGAGGAAACCCACTTCTTCTGAGAACAATATTGCAAATGGATTGAAACTCAGCCTAACCAACAATACAGGCAGTGAATCGAGCATCTCCAGCACCAGGGACGAGTCTGGTTCAACCTGCACTAATCTCTCACTCACTCCCTCGTCCGCCAAACCCTCTCCCTTTTGCTCTAATATGAGCCATGGCCAGGGAACACCGATCGGAGGAAATAGTGGAGGCAGGGGAAAGGGGAAGGGTGTGGAGCAATCGAATAATAATTCGGATTCAAAATCGGAAGTATCTGCGAGCGAGTCAGTGGGAACCAACAGGAACAATTTGTCACATTCAGGGGGAAGTGAAAACGTGGGAGTTAAGATAGAGGTGGGGTTCATTGATTTTCTGGGGGTGGAAACTGGCGCATGA 1065 0.5146 MSFHHFINGGDGFRVAIKQLPSTPLLVPQPPLSTIFVAMGGHPGEIESYKSEIGFQILNPSFMGSRAAEKSVGEVDYHFLVETDGMSLKLSEEAEAKRPDAGKSGYTKLCARGHWRPGEDAKLKELVAQYGPQNWNLIAEHLQGRSGKSCRLRWFNQLDPRINRRAFSEEEEERLLGAHKAYGNKWALIARLFPGRTDNAVKNHWHVIVARRQREQSHVFRRRKPTSSENNIANGLKLSLTNNTGSESSISSTRDESGSTCTNLSLTPSSAKPSPFCSNMSHGQGTPIGGNSGGRGKGKGVEQSNNNSDSKSEVSASESVGTNRNNLSHSGGSENVGVKIEVGFIDFLGVETGA 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0562 354 PANTHER MYB PROTEIN-RELATED 112 302 - -
Lele06g0562 354 ProSiteProfiles Myb-like domain profile. 159 209 IPR001005 -
Lele06g0562 354 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 159 213 IPR017930 -
Lele06g0562 354 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 112 158 IPR017930 -
Lele06g0562 354 FunFam MYB transcription factor 112 163 - -
Lele06g0562 354 MobiDBLite consensus disorder prediction 226 288 - -
Lele06g0562 354 MobiDBLite consensus disorder prediction 298 333 - -
Lele06g0562 354 CDD SANT 166 206 IPR001005 -
Lele06g0562 354 ProSiteProfiles Myb-like domain profile. 112 158 IPR001005 -
Lele06g0562 354 CDD SANT 115 156 IPR001005 -
Lele06g0562 354 SUPERFAMILY Homeodomain-like 112 205 IPR009057 -
Lele06g0562 354 MobiDBLite consensus disorder prediction 213 334 - -
Lele06g0562 354 Gene3D - 112 163 - -
Lele06g0562 354 Pfam Myb-like DNA-binding domain 112 158 IPR001005 -
Lele06g0562 354 Pfam Myb-like DNA-binding domain 164 207 IPR001005 -
Lele06g0562 354 Gene3D - 165 234 - -
Lele06g0562 354 SMART sant 163 211 IPR001005 -
Lele06g0562 354 SMART sant 111 160 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0562 Lele-ChrLele06 3382661 3383994 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0562 102 350 MYB Transcription Factor Family AT5G17800 50.193 1.31e-73 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele06g0562 Myb_DNA-binding 2.1e-15 CL0123