Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele06g0561 | ATGGAAGATCAAGCTGAGGGCCAACAACAGGATACCAATACTCGGAGCGAGCCGGTGAGGTCAAGGTGGACGCCCAAGCCTGAGCAAATCCTCATCCTTGAATCCATCTTCAACAGTGGCATGGTTAATCCTCCCAAGGAGGAAACCATCCGCATCAGAAAGCTCCTCGAGAAGTTCGGCTCCGTCGGCGACGCTAACGTCTTCTACTGGTTCCAGAACCGCCGCTCCAGATCCCGCCGCCGCCAACGCCAGATGCAGGCCTCCCTCGACCAGCCAAACCAGCTTCAGCCTCAGCCAGGTTTTGCCGGTGCAATTCCTTATGATCATCATCATCAACCTCTCACCACCTCCTCTAATACTTCTGATCCACTTCCTCCTGTTACAACTACCGTGCCTCTTGCCGCCGCTTCTCCGTCTTTCCTTGATCTCTCCGGTTCGTCTTCTTCTTCTTCTGGCATGCTTGCCGGCCAAGAAGCCCTTGACGGTCTTTTCTCGGTGGTCTCTCAAATGGATTTCCCCGAATTTGATCACACTTCTGCTGCTTCTTCAGCTCTATACCCTCCCCCATCTCATGCTTCCTCCTTCAACTATCATTCTGGACTGATCACAGTGTTTATCAATGGAGTAGCAACAGAAGTTCCAAGGGGAGCATTGGACATAAAAACAATGTTTGGGCAAGACGTAGTGTTAGTTCATTCCTCCGGAGTCCCACTTCCTACCAATGACTTTGGTTTCCTGATGCAGAGCTTGCAGCATGGCGAAAGTCTCAAAGCCAACATAATCAAGTATGAACACAAGCAACTAGCAGCAATGGGAGCTTCCTTTTTTGTTTCTCCAAATTAA | 843 | 0.5042 | MEDQAEGQQQDTNTRSEPVRSRWTPKPEQILILESIFNSGMVNPPKEETIRIRKLLEKFGSVGDANVFYWFQNRRSRSRRRQRQMQASLDQPNQLQPQPGFAGAIPYDHHHQPLTTSSNTSDPLPPVTTTVPLAAASPSFLDLSGSSSSSSGMLAGQEALDGLFSVVSQMDFPEFDHTSAASSALYPPPSHASSFNYHSGLITVFINGVATEVPRGALDIKTMFGQDVVLVHSSGVPLPTNDFGFLMQSLQHGESLKANIIKYEHKQLAAMGASFFVSPN | 280 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele06g0561 | 280 | MobiDBLite | consensus disorder prediction | 79 | 129 | - | - | |
Lele06g0561 | 280 | FunFam | WUSCHEL-related homeobox 11 | 20 | 87 | - | - | |
Lele06g0561 | 280 | SMART | HOX_1 | 18 | 85 | IPR001356 | GO:0003677 | |
Lele06g0561 | 280 | SUPERFAMILY | Homeodomain-like | 14 | 87 | IPR009057 | - | |
Lele06g0561 | 280 | PANTHER | WUSCHEL-RELATED HOMEOBOX 11 | 4 | 255 | IPR044558 | GO:0003700|GO:0048830 | |
Lele06g0561 | 280 | Gene3D | - | 18 | 88 | - | - | |
Lele06g0561 | 280 | Pfam | Homeodomain | 20 | 80 | IPR001356 | GO:0003677 | |
Lele06g0561 | 280 | MobiDBLite | consensus disorder prediction | 111 | 129 | - | - | |
Lele06g0561 | 280 | MobiDBLite | consensus disorder prediction | 1 | 26 | - | - | |
Lele06g0561 | 280 | ProSiteProfiles | 'Homeobox' domain profile. | 16 | 81 | IPR001356 | GO:0003677 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele06g0561 | Lele-ChrLele06 | 3375566 | 3377305 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele06g0561 | 14 | 261 | Wox Gene Family | AT3G03660 | 49.624 | 4.25e-68 | 211 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | HB-WOX | Lele06g0561 | Homeodomain | 3e-13 | CL0123 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lele06g0561 | 06 | 3375566 | 3377305 | Lele06g0561 | 06 | 3375566 | 3377305 | ECH | |
Lele06g0561 | 06 | 3375566 | 3377305 | Lele07g0762 | 07 | 4336255 | 4338017 | hybridization | |
Lele06g0561 | 06 | 3375566 | 3377305 | Lele08g0567 | 08 | 3427426 | 3428989 | hybridization |