Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0559 ATGAACGCACGCAGTTCCCCAGGATGCGATGCCTCACTTCTGATAGATTCTAAGAACAAAACATTGATGAGATCAGAGAAAGACGCGGGGTTGGATAGCGTATTCCTTCGAGGGTTCGATGTAATCGACGAGATCAAAGAAAGCCTGGAAACCGAATGCCCTTCTACGGTTTCGTGTGCCGATATCATAGCACTTGTCGCCAGAGATGCGGTGGGCGTCGCCGGAGGACCCAAATATGAGGTTCTCACAGGGAGGCGCGATGGCCTTGCTTCAAATGCGGGCGATGTAAACTTACCACAGCCTGAATTTCCAATGAAGCGAGCTCTTGGTTTTTTCACCAATGTCGGGTTGACCTTAGCTGACATGGTCACACTTTTGGGTGCTCATACGATTGGTATTGCCCATTGTGGTTTCTTCACATCTAGGCTCGAAGGGCATCAATCTGGTGATCACCCTCCAATGGATCCAGTGTTGAAAGCCAAGCTGACCAAGTTTTGTGCTCATGATGAAAATCGCAAGGCGTTTATGGACCAAGCCACACCATTTGTTTTTGACAATTCATTCTACAAGCAGCTTGTTCTGAGGAGGGGTATATTGGAACTGGATGAACGCCTTGCGTTTGATAATTCCACTATAGCTCTTGTTTCCAGCTCACAGCTTTGTGTTTATCAAACAGAGTCCGCTGAGGGAAGGAAATCAGAACACGATGCGCGGGATAACTTGCTCCTTCGAGGATTCGACGTAATCGATGATATCAAAGAAATCCTGGAAGTTGAATGCCCTTCTTGCCGTAAGAGATGTGGTGGCTCTGGCGGGAGGACCCAAGGTTGGATTCTATCGCAGAAGCTGCCCATCCGCCGAGACTATCGTCCGTCATGCTGGGCACCGGCGCTTCAAACATCACAGATTCATCACCGCCGACTTGCTTCAAATGCACTTCCACGATCGCTTTGTCAGATCCCAGGGATGCGACGGCTCCATATGCTAATAGATCCGAGGAGGGGAAACGCGTCGGAGAAACAAGCACCGGTCAACATAAACCTTGACAGCTTTGAGTTGATCGACGAGATAAAGAGAGCCTTAGAGAAAGCCTGTCCTTCCACAGTTTTGTGTGCAGATATCTTAACACTGGCCACAAGGGACGCGGTGGCTCTATCGGATCACTATGGGATCAATGAGCAGGGTTCGCAGATCAATTTGTGA 1203 0.4913 MNARSSPGCDASLLIDSKNKTLMRSEKDAGLDSVFLRGFDVIDEIKESLETECPSTVSCADIIALVARDAVGVAGGPKYEVLTGRRDGLASNAGDVNLPQPEFPMKRALGFFTNVGLTLADMVTLLGAHTIGIAHCGFFTSRLEGHQSGDHPPMDPVLKAKLTKFCAHDENRKAFMDQATPFVFDNSFYKQLVLRRGILELDERLAFDNSTIALVSSSQLCVYQTESAEGRKSEHDARDNLLLRGFDVIDDIKEILEVECPSCRKRCGGSGGRTQGWILSQKLPIRRDYRPSCWAPALQTSQIHHRRLASNALPRSLCQIPGMRRLHMLIDPRRGNASEKQAPVNINLDSFELIDEIKRALEKACPSTVLCADILTLATRDAVALSDHYGINEQGSQINL 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0559 400 Gene3D - 8 98 - -
Lele06g0559 400 PRINTS Haem peroxidase superfamily signature 57 74 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele06g0559 400 PRINTS Haem peroxidase superfamily signature 121 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele06g0559 400 PRINTS Haem peroxidase superfamily signature 75 87 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele06g0559 400 PRINTS Haem peroxidase superfamily signature 177 192 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele06g0559 400 ProSitePatterns Peroxidases proximal heme-ligand signature. 121 131 IPR019793 -
Lele06g0559 400 PANTHER PEROXIDASE 25-RELATED 328 386 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele06g0559 400 ProSiteProfiles Plant heme peroxidase family profile. 328 400 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele06g0559 400 SUPERFAMILY Heme-dependent peroxidases 293 388 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lele06g0559 400 Gene3D - 318 396 - -
Lele06g0559 400 ProSiteProfiles Plant heme peroxidase family profile. 8 216 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele06g0559 400 FunFam Peroxidase 99 222 - -
Lele06g0559 400 Pfam Peroxidase 336 387 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele06g0559 400 Pfam Peroxidase 8 217 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele06g0559 400 PRINTS Plant peroxidase signature 75 90 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele06g0559 400 PRINTS Plant peroxidase signature 56 66 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele06g0559 400 PRINTS Plant peroxidase signature 120 132 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele06g0559 400 PRINTS Plant peroxidase signature 175 190 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele06g0559 400 PRINTS Plant peroxidase signature 37 50 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele06g0559 400 PRINTS Plant peroxidase signature 191 208 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele06g0559 400 Gene3D Peroxidase, domain 2 99 217 - -
Lele06g0559 400 SUPERFAMILY Heme-dependent peroxidases 7 216 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0559 Lele-ChrLele06 3357830 3362579 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0559 328 386 Peroxidase AT5G17820 59.322 2.47e-11 62.8