Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0558 ATGCCAATTAGCAACCAAACAATGAAGATATCAGTTGTTGTGTGCTTCTTGGTGGTGATGCTTCCCATGGCATTTGCTCAGCTCAAGGTCGGATTCTATGAGTCGTCTTGCCCAAAAGCTGAGTCCATCGTGAAGCAAGCGGTGCAGAAGCGATTCAACAACGACAACACCATCACTGCAGCCTTGCTTCGCATGCACTTTCACGACTGTTTCGTCCGAGGTTGCGATGCATCATTACTGATAAATTCGACTGACGCAGAGAAAGACGCCGGTCAAAATGCGAGGGTACGAGGATTTGATTTGATCGATGACATGAAGGAAAGCGTTGAAGTAGCCTGTCCTTTAACTGTGTCGTGTGCTGATATCATAACACTAGCCACCAGAGACGCCGTGGCTCTTGCAGGAGGACCCAAATACGAGGTTCCCACCGGACGACGTGACGGCCTCGTCTCTAAAAGCGGCGACGTTGATTTGCCTGGACCAGGGATCTCTGTGCAGAATGCATTGAAGCACTTTGCCGACAAGGGAATCGAACGAGAAGACATGGTGAGCCTTATGGGTGGACACACAGTGGGAAAGGCATTTGGTACATTCTTGGACGCCAAGACGCCCTTCGTAGTGGATAACCAGTACTATAAGCAGATTCTTCGAAATAAGGGCGTTCTATCTATTGATCAAAACCTTGCTGTTTCTACGTCAACTAAGAGCATTGTCACTGCTATCGCATCTAACTCTACCAAGTTTCAGACGAGCTTCGCTAATGCAATGGTCAAGATGGGTCGAATTCAAGTTCTGGTCGGTAATGCGGGAGAAATTCGTAAGAAATGCACTCTTGAAATGAACGGATGCGATGCCTCGCTTCTCATAGACACCAAGCACGATAGGGAACTTTCAGTGAAATCTGAGAAAGGCGCGTTTGATAGCTTCTTCCTTCGAGGATTTGATGTAATCGACGCGATCAAAGAAAACCTGGAAGCCGAATGCCCTTCTACGGTTTCGTGTGCCGATATCATAACAATTGTCGCCAGAGATGCGGTGGGCGTCGCCGGAGGACCCAAATATGAGGTTCTCACAGGGAGGCGCGATGGCCTTGTTTCAAATGTCACGGAAGTAAAATTACCACAACCTGATTTTCCAATGAAGCAAGCTCTTGATTCTTTCACCGACGTTGGGCTAACATTAGCTGATATGGTCACCCTTTTGGGTGCTCATACGTTTGGTGTTGCCCATTGTGGTTTCATCGAACCTAGGCTTGAACCAAGACCTAGTGGTGGGAATCAATCTGCTGATCACCCTCCAATGAATCCCGTGTTGAAAGCCAAGCTTACCAAGTTTTGTGCTCATGATACTGATCACCCTGTGTTTATGGACCAAGCCACGCCCTTTGTTTTTGACAATTCATTCTACAAGCAGCTTCTTCTGAGGAGGGGTACATTGGAACTGGATGAACGCCTTGCTTTTGATAATTCCACTATAGCACTTGTTTCCAGGTATGCCTCAGACAATGAGGCATTTCTGCAGAGCTTTGCGAGTGCCATTGTCAAGCTGGGAAGCATTCAAGTTCTGACTGGAGAGGAAGGGGAGATTCGAAAGAATTGTAGGGCTTTTAATAATCCCAAGTAG 1623 0.4732 MPISNQTMKISVVVCFLVVMLPMAFAQLKVGFYESSCPKAESIVKQAVQKRFNNDNTITAALLRMHFHDCFVRGCDASLLINSTDAEKDAGQNARVRGFDLIDDMKESVEVACPLTVSCADIITLATRDAVALAGGPKYEVPTGRRDGLVSKSGDVDLPGPGISVQNALKHFADKGIEREDMVSLMGGHTVGKAFGTFLDAKTPFVVDNQYYKQILRNKGVLSIDQNLAVSTSTKSIVTAIASNSTKFQTSFANAMVKMGRIQVLVGNAGEIRKKCTLEMNGCDASLLIDTKHDRELSVKSEKGAFDSFFLRGFDVIDAIKENLEAECPSTVSCADIITIVARDAVGVAGGPKYEVLTGRRDGLVSNVTEVKLPQPDFPMKQALDSFTDVGLTLADMVTLLGAHTFGVAHCGFIEPRLEPRPSGGNQSADHPPMNPVLKAKLTKFCAHDTDHPVFMDQATPFVFDNSFYKQLLLRRGTLELDERLAFDNSTIALVSRYASDNEAFLQSFASAIVKLGSIQVLTGEEGEIRKNCRAFNNPK 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0558 540 Gene3D - 28 164 - -
Lele06g0558 540 FunFam Peroxidase 31 170 - -
Lele06g0558 540 Gene3D - 280 537 - -
Lele06g0558 540 SUPERFAMILY Heme-dependent peroxidases 27 277 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lele06g0558 540 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601
Lele06g0558 540 FunFam Peroxidase 374 516 - -
Lele06g0558 540 SUPERFAMILY Heme-dependent peroxidases 281 537 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lele06g0558 540 Gene3D Peroxidase, domain 2 198 259 - -
Lele06g0558 540 ProSiteProfiles Plant heme peroxidase family profile. 27 537 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele06g0558 540 CDD secretory_peroxidase 27 276 IPR033905 GO:0004601|GO:0042744
Lele06g0558 540 ProSitePatterns Peroxidases proximal heme-ligand signature. 396 406 IPR019793 -
Lele06g0558 540 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele06g0558 540 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele06g0558 540 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele06g0558 540 PRINTS Haem peroxidase superfamily signature 457 472 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele06g0558 540 PRINTS Haem peroxidase superfamily signature 181 196 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele06g0558 540 Gene3D Peroxidase, domain 2 165 197 - -
Lele06g0558 540 ProSitePatterns Peroxidases proximal heme-ligand signature. 181 191 IPR019793 -
Lele06g0558 540 CDD secretory_peroxidase 281 536 IPR033905 GO:0004601|GO:0042744
Lele06g0558 540 Pfam Peroxidase 278 501 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele06g0558 540 Pfam Peroxidase 44 243 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele06g0558 540 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele06g0558 540 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele06g0558 540 PRINTS Plant peroxidase signature 180 192 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele06g0558 540 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele06g0558 540 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele06g0558 540 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele06g0558 540 Gene3D Peroxidase, domain 2 374 516 - -
Lele06g0558 540 PANTHER - 198 277 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0558 Lele-ChrLele06 3349885 3352893 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0558 235 538 Peroxidase AT4G26010 42.295 4.34e-75 239