Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0556 ATGTCGGCCAACTCCAGCCATCCTGGTTTTATACTCTTCGGCCAAAAGATGTCCTCCGCCTCCTCGCCGTCTCAGATTCCGGCCGCCTCCAACTCTCCTCCCCAGGCATTGATATTGTTTTCGCCATTCACGCTTCCTGCGCTCTTGATGGTTGGTTTCCGGGATTCATTTCAATCTTTCATAAGCACTAATGGGAGCCACGTTCATGATCGAAGTAGCTCGAAGAAATCGGGAGTGGGAATGCCTTCTACAGAAAACTCCGAACAACAAAATGTGCAGCAAAATGAGGCAACGAGGGTAAGCAGTGCAGAAGAATTTAAAATGATGAAGAAACCAGACAAGATTCAACAGTGTCCACGATGCAACAGTATGGACACAAAGTTCTGTTATTTCAATAACTACAACGTGAATCAACCTCGACATTTCTGCAAGAGCTGCCACAGATATTGGACTGCCGGTGGAGCAATGAGAAATGTCCCAGTCGGTGCAGGAAGACGAAGGAACCGGCAACTATCCTCGCCATACCATCGCCACACCGCAGTATCCTCAGAAGGTGTTTCAGTTCCAACCCCAAACACAGACTCATCTTCTCACCAAGGTTTCTCAACTTTTGAATCCTCGCCTGCTTTCAAGTCAGGACCACCAGATAATACTAGCACCGTGTTGAGATTTGGTCCAGAGGCCCCTGTTTCTGAATCCGCGAGTTCAATTCTGAATCTTGGAAATGGGGAGGAGGCATGCGGGTGTGGATCTTCTGCTCAGGGAAATGAAGTATCAGAACTTGTAATGCAATGGAGCAGAGGTGTTCCCAATCTGATGAATACAGCAAATGGGGTGCGATGCTATCCTGCTGCACCATGGGTGTTCCCAGCCCATTGGTATGCTGAGAATCAGATTGGCTCACCAAACATTCCTGTACAATTTGTGGCAGCCCCATGTTGGAGTAATGGGAATATCTGTTCTGCACCAGGAACAGGAACAGTTTCAATTGGCTCTAATGGCTGCCTCTCCTCCTCATCCTCAACCAGTAATGGACTTGGAAGTCACTGGTGA 1053 0.4815 MSANSSHPGFILFGQKMSSASSPSQIPAASNSPPQALILFSPFTLPALLMVGFRDSFQSFISTNGSHVHDRSSSKKSGVGMPSTENSEQQNVQQNEATRVSSAEEFKMMKKPDKIQQCPRCNSMDTKFCYFNNYNVNQPRHFCKSCHRYWTAGGAMRNVPVGAGRRRNRQLSSPYHRHTAVSSEGVSVPTPNTDSSSHQGFSTFESSPAFKSGPPDNTSTVLRFGPEAPVSESASSILNLGNGEEACGCGSSAQGNEVSELVMQWSRGVPNLMNTANGVRCYPAAPWVFPAHWYAENQIGSPNIPVQFVAAPCWSNGNICSAPGTGTVSIGSNGCLSSSSSTSNGLGSHW 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0556 350 MobiDBLite consensus disorder prediction 174 219 - -
Lele06g0556 350 MobiDBLite consensus disorder prediction 76 101 - -
Lele06g0556 350 ProSitePatterns Zinc finger Dof-type signature. 118 154 IPR003851 GO:0003677|GO:0006355
Lele06g0556 350 Pfam Dof domain, zinc finger 113 170 IPR003851 GO:0003677|GO:0006355
Lele06g0556 350 PANTHER CYCLIC DOF FACTOR 2 1 349 IPR045174 GO:0003700|GO:0006355
Lele06g0556 350 MobiDBLite consensus disorder prediction 64 103 - -
Lele06g0556 350 ProSiteProfiles Zinc finger Dof-type profile. 116 170 IPR003851 GO:0003677|GO:0006355
Lele06g0556 350 MobiDBLite consensus disorder prediction 170 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0556 Lele-ChrLele06 3341853 3343527 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0556 64 240 C2C2-Dof Transcription Factor Family AT1G26790 47.778 1.32e-39 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lele06g0556 zf-Dof 3.3e-31 No_clan