Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0550 ATGCCACAACCGCACCAGATCTCTCTGTGCTCTGCTTCTTGTCCCTCGTCTTATTCGATTCTTTCTCCCACCTATCAAAATATCTATCGTATTGCAATTACAATTCCCTTTCCCTTTTTAACTCTCCCAAATCTCTCTTTTTTTCTGCTCTTACGCGGAGAGCGCACCGGACCCATTACACCCATAAATCCTTGGAGCACCCTAATCCGAGGTCAGTTCCCGATTGATCTGTTATCTGTTAACCTGCTCCCCTTAATCGATTCTTCTTTTCTCCTTCTCTCCCGCTTCACGCCTGCATATTCGTTTCCTTATTTCACAAGAAAATTGCGAGCTCCCTCATCTCTCATGCCTAGCTCTGTTTCGCAATCGAAAAGCTTGTTCTTCAATGTTTCGTTGCTCCTCGTCGTATGTGCTTTCCTGATTATCTACTTCCACTCTTCGGAACTGCCTGTTCGGAGGAACCGTGCCGCCTTAGTTGACGGTGCCGACCATGATTGCAACATCTTCCACAGTCTAGAAGGCTACAGAGCCAAGTGTTTGTCCCTAAAATCCAACGGCCCATGCGTTTCACAGGGCTATATTGACTACCTTTACCTTTTCTACTGCGATTTGGGTCGATTCCCTTTGTTGGGTTATACTCTTCTCTTTCTTTGGCTCCTAGTCTTGTTTTACCTGCTCGCTAATACAGCTTCCGAATACTTCTGTCCCTCACTTGAACACCTGTCGAAACTACTGAAACTGTCCCCTACAATAGCTGGGGTGACCCTTCTTTCACTCGGAAATGGTGCCAATGACGTTTTCGCCAGCATCGTCTCCTTCAAGGATAGTGGAACAAGCGACATTGGGTTCAATTCGGTACTTGGGGGTGCTTTCTTCGTGTCCTGCGTCGTGGTTGGAATTGTAAGCATCTCAATTCGTCGCAGGGTGATTCAAGTTAAAAGGCACGACTTTGTAAGAGATGTTTGTTTTCTTCTCGTGGTTCTTCTGTGCTTGCTTGTAATATTCATCACTGGTGGGATCAATTTATTTGGAGCAGTGGGTTTTACTTTGATATATATCGTGTATGTTTTTGTTGTTTATGTCTCGTCCACCTGCTGTGAGGGTGTTTCTGGAGATTCTGAACGGAATAGTAATCCATGTTATAACACAGACTTGACAGTGCCTCTTCTCATTGGCATGGAAGAAGGCGAATTTGATTGTAACGAGGAAAGGGATGGAGATTTTGGCCTGAGAATCGAGAAATGCTGCTGTATGAAATCATTGCTGTGCCAAAAGGCATTTTGGGTTCTACAGATGCCACTTGACTTGCCAAGGAGATTGACGATTCCTGTTATTTGTGAAGAAAGATGGTCTAAGCCATATGCAATTTCTTCAGTAACACTGGCACCTCTTCTGTTATCAGTAATATGGATCCCTTACCAGGAAAATGGTTTCTTCAACAACGATGATATAATCATTTATGGGATTGGATTGTTGATTGGGATAATATTTGGAGTAACTGCATTTTTCACAACAAAGAGCTCAAGGTCACCAAAAAATTGCCGGTTTCCATGGCTTGCAGGAGGCTTCATAATGAGTGTTACATGGAGTTACATTTCAGCCCAGGAATTAGTGGGATTGTTAGTTTCACTTGGCTGCATATGTGGGATAAGTCCTTCAATAATAGGGCTCACAGTTCTTGCCTGGGGGGATTCTCTCGGAGATTTGATGACAAATTTAACAATGGTTTTGAAGGGTGGATCGGAAGGCGCTCAAGTAGCCATATCAGGTTGTTATGCAGGTCCCATCTTCAACATTCTTATCGGCTTGGGTTTGTCTCTAATAATCTCTACTTGGTCGAAGTACCCATCATCTCTAGTGATTCCTTACGACCCATATCTCTTGGAGATGTTAGCGTTTTTGGTTGGTGGATTGGTTTGGGCACTCGTGATTTTAACAAGAAGAGACATGAAGCTTGATGGAGTCTTAGGAGGAGGGCTCTTAATCATTTACTTCATTTTTCTGTTTCTGAGGCTGATTCAGACGCTTGGGCTATTCCAGTTTCACACATTATAG 2055 0.4365 MPQPHQISLCSASCPSSYSILSPTYQNIYRIAITIPFPFLTLPNLSFFLLLRGERTGPITPINPWSTLIRGQFPIDLLSVNLLPLIDSSFLLLSRFTPAYSFPYFTRKLRAPSSLMPSSVSQSKSLFFNVSLLLVVCAFLIIYFHSSELPVRRNRAALVDGADHDCNIFHSLEGYRAKCLSLKSNGPCVSQGYIDYLYLFYCDLGRFPLLGYTLLFLWLLVLFYLLANTASEYFCPSLEHLSKLLKLSPTIAGVTLLSLGNGANDVFASIVSFKDSGTSDIGFNSVLGGAFFVSCVVVGIVSISIRRRVIQVKRHDFVRDVCFLLVVLLCLLVIFITGGINLFGAVGFTLIYIVYVFVVYVSSTCCEGVSGDSERNSNPCYNTDLTVPLLIGMEEGEFDCNEERDGDFGLRIEKCCCMKSLLCQKAFWVLQMPLDLPRRLTIPVICEERWSKPYAISSVTLAPLLLSVIWIPYQENGFFNNDDIIIYGIGLLIGIIFGVTAFFTTKSSRSPKNCRFPWLAGGFIMSVTWSYISAQELVGLLVSLGCICGISPSIIGLTVLAWGDSLGDLMTNLTMVLKGGSEGAQVAISGCYAGPIFNILIGLGLSLIISTWSKYPSSLVIPYDPYLLEMLAFLVGGLVWALVILTRRDMKLDGVLGGGLLIIYFIFLFLRLIQTLGLFQFHTL 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0550 684 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 421 679 - -
Lele06g0550 684 Gene3D - 455 672 IPR044880 -
Lele06g0550 684 Gene3D - 247 373 IPR044880 -
Lele06g0550 684 Pfam Sodium/calcium exchanger protein 519 671 IPR004837 GO:0016020|GO:0055085
Lele06g0550 684 Pfam Sodium/calcium exchanger protein 216 360 IPR004837 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0550 Lele-ChrLele06 3301617 3303671 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0550 116 677 Antiporters AT5G17850 50.175 1.42e-157 464
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0550 06 3301617 3303671 Lele07g0756 07 4285490 4287199 hybridization
Lele06g0550 06 3301617 3303671 Lele08g0555 08 3349971 3351680 hybridization