Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0545 ATGTATCTTTCCCGGCGTATAATCACCAAAGCCTCGCATCTCCGTTACTTCTCAGAAGCCGCCGCAGCCGTTGCCCACCAAGAGCCTCTTGACCTCCTCCCACCATTCACGTATCTCGAAGGTTTTCCGAGGCCCGACCCTAGATACGCTGAGACCATCCTTGCGATACCTCGCTCCGCTTCTGGAAGTATCATTTCTGCCAAAGAGCGCAAGGCTGGACGAGTGCCTAGCATCGTCTTTGAGCAAGAGGATGGCCAGCACGGCGGCAACAAGCGCCTCATTTCCGTCCGTACCAATCAGATGCGAAAGCTCGTCAACCATCTCGGTCGATCATTCTTTTTGTCCAGACTCTTTGACCTGGAGGTTCGGTCGGAGTTCGTGTCTGAAGATATTGTAGAGAAGATTCGGGTTTTGCCCAGGCTGTTTCGTTGCATTTCTTTGTTCAAGCATTCAGTTGCAGCAGGTGCCATGTATTATTCTTGTCTTAGAAGCAGATTCCGTTTACTTTTCTCTGGGAAGTCAACATTGGAGCAGCCTCTTCCCATGTAG 549 0.51 MYLSRRIITKASHLRYFSEAAAAVAHQEPLDLLPPFTYLEGFPRPDPRYAETILAIPRSASGSIISAKERKAGRVPSIVFEQEDGQHGGNKRLISVRTNQMRKLVNHLGRSFFLSRLFDLEVRSEFVSEDIVEKIRVLPRLFRCISLFKHSVAAGAMYYSCLRSRFRLLFSGKSTLEQPLPM 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0545 182 Pfam Ribosomal L25p family 55 124 IPR029751 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Lele06g0545 182 PANTHER RIBOSOMAL PROTEIN L25/GLN-TRNA SYNTHETASE, ANTI-CODON-BINDING DOMAIN-CONTAINING PROTEIN 23 140 - -
Lele06g0545 182 CDD Ribosomal_L25_TL5_CTC 52 140 IPR029751 GO:0003735|GO:0005840|GO:0006412|GO:0008097
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0545 Lele-ChrLele06 3266186 3267093 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0545 06 3266186 3267093 Lele06g0545 06 3266186 3267093 ECH
Lele06g0545 06 3266186 3267093 Lele07g0752 07 4256128 4263375 hybridization
Lele06g0545 06 3266186 3267093 Lele08g0549 08 3320683 3328237 hybridization