Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0544 ATGGAACCCGTTTCAAAATCCTGTAAGTCCCATGAAGAAGAGGAAGGCGACAAAAGACCTCTACTTCAATGCGCAGAACTCATCCTCCCGTGGCTAACCTCTTTGGAGCTTGCCAATGTCTCTTTGACCTGCAAAGCCTTTTCCCTAATTTCCAAGACCATCATCCTCCGCCGCGTATCTGATTCTTCTAGAGGATTCGAGAATTTGCCTATCCCATTTCGCAACACCTCTGATGATACGCCATACGCTTTCTTCATCTACACTCCTTCCCTAATTCTACATTCTGATTCACAATTTCTTCGTCAATCTTGGGGTTCGAATTTTGCTGCCACCCGTGACTGGGTTGATAAGCGTGCTATGGAATCGATGAGTTTAGTCGATGAAGAGGGTCAGAGTATATCAGGATGTGACTGTGACACTTGTGGGGATGTAGGGTATGAAGATGACAGGTGCCCTTGTTCGAGCTTGGCTGGGTTGGATGTGACTAACGAGTGCGGCTCGAGTTGTAGGTGCGGGTTGCAGTGTGGAAATCGGTTGAGTCAGAAGGGAATTTCAGTTCGGTTGAACATTGTGAGGGATAGGAGGAAAGGATGGGGCTTGTACGCTGACCAGTTGATACAGAAAGGGCAGTTCGTTTGTGAATATGCAGGTGAACTCTTGACAACCGTGGAAGCGAGGAGGAGACATCGATGTTATGATGAGCTTTCATCACAAGGGCAGTTTTCTTCTGCTCTTTTGGTTGTGAGGGAGCATCTGCCATCGGGCAGGGCTTGTTTGAGGATGAACATTGATGCCACAACAATAGGAAATGTTGCACGGTTCATTAATCATTCTTGTGATGGTGGTAATTTAAGCACTAAACTAGTGAGAAGGTCGGGAGCTTTATTTCCTCGACTTTGTTTCTTTGCTTTAGAAGATATAGAAAAGGATGAAGAGCTTACATTTAGCTATGGAGAAGTCAGGACAAGGCCTATGGGTTTGCCATGTTTTTGTGGTAGCTCTTCTTGCTTTGGAACATTGCCCTCAGAAGACACTTAA 1038 0.4576 MEPVSKSCKSHEEEEGDKRPLLQCAELILPWLTSLELANVSLTCKAFSLISKTIILRRVSDSSRGFENLPIPFRNTSDDTPYAFFIYTPSLILHSDSQFLRQSWGSNFAATRDWVDKRAMESMSLVDEEGQSISGCDCDTCGDVGYEDDRCPCSSLAGLDVTNECGSSCRCGLQCGNRLSQKGISVRLNIVRDRRKGWGLYADQLIQKGQFVCEYAGELLTTVEARRRHRCYDELSSQGQFSSALLVVREHLPSGRACLRMNIDATTIGNVARFINHSCDGGNLSTKLVRRSGALFPRLCFFALEDIEKDEELTFSYGEVRTRPMGLPCFCGSSSCFGTLPSEDT 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0544 345 SUPERFAMILY SET domain 56 331 IPR046341 -
Lele06g0544 345 SMART set_7 186 324 IPR001214 GO:0005515
Lele06g0544 345 Pfam SET domain 197 318 IPR001214 GO:0005515
Lele06g0544 345 ProSiteProfiles SET domain profile. 186 318 IPR001214 GO:0005515
Lele06g0544 345 Gene3D SET domain 45 324 IPR046341 -
Lele06g0544 345 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 57 335 - -
Lele06g0544 345 ProSiteProfiles Post-SET domain profile. 325 341 IPR003616 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0544 Lele-ChrLele06 3262201 3263734 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0544 164 340 C2H2 Transcription Factor Family AT2G23740 36.898 1.72e-24 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lele06g0544 SET 3.9e-19 No_clan