Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0543 ATGAACAGAAGTTATAACGCCCAGAAATCACGGACACTTGTCCTTTGCCATGCAGGTCGAAGCAAAGGTCTTCCTTGCGTTTGCTTGAATGTCTGGGTGAAAAGACACAGGCCATCTGCATCAATTAAGGGCTTCAGACTCTGCATAATCTGTGAAAATGGAGGCGGGTTTGGTGGAACAGGGAAGAGACAAGGTAGGGCATGTGAACAAGGTTGGTTATGTGAAGAGATTCATCGGCAAGAAGAGGAAGCCTTACCGAAGGATGCCGTGGAGCCAGAAGATTTTGGACTAAGCAGTGACTTGCAATTCTTCAGGCCTGGAAATTTGTTCAAAGAGAATCCAAGGGTCACTTACACAACCATTTACCAGTGCGATAATTTCTCTGTAAGCCTCGAAGGCTCTTGTGTATTGAAATTGGCAAAGTTAAGAGCTAATAAGGTGTTCAACGCACCATGTGATGCTTCAGTGTTGTATCCGACCACAGGGGGCAATATCCATGAATTCACAGCCATAACTCCATGCGCAGTGCTTGACGTGCTTGGCCCTCCTTATTCTAAACAAGATGGCCGCGACTGCTCCTACTACAGAGATCACCCCTACAATGCCTTTTCAAATGGTTCGGCGAAAGACGAAGATGGAAGTTATTATGGGTGGTTGGAGGAGATTGAGGTGCCGGAGAATTCTGAGATGGATGGAATTGAATACTTGGGACCTCCAATTACTGAACCTGATAATCGGGAAATTGACTTTTATGGCCATGCGGAAAGTTTTGCACACAGTGGTGACGATGAGGCTAATTGGTTTCTCTGCTCTTCAGGTGAGAATGAACACATACCGGTTCTTAAGATAAGATTTGATTTCGGGACTTTGTTATCAACCTCTGAGACTTTTGGCTTAGGATTAACGCAAGATAACTACTTCATTAAACTTAACCGGCCTTATTGCAATTGCAGGGTTTCTGCTCATGATCTTGGGAAACCAGGCTTCAATTCTGAGAGTATATGTGATCTTGAGGATATATTTTCTCAAGCACTTTCTAGAATACCACATAACTCTAGTTCATTTCCTGCATACCATTTACTAATGGCAGAACAATTCTATCTTTCGAAGCTTTTCATTTTTGTGACACTTATACTTTCTATCAATCATTCAGAGCAACTGCAATCCTCACTGCCTCAGACTCTTCTAAGAATCAAACGGCTTTTGAACTTTCCTTCTGCTTTAAGTAGCTGGAATAGCAGCACAGACTTCTGCAGCCCTGACTCAGATTCTTCTCTTACTGTAGTATGCTATGAAGATACCATCACGCAGCTTCATATAATAGGTGAAAAAAGAGCTTCGACACTTCTTAAGAATTTCTCAACAGATGCCTTTGTCGCAACACTAGCCAGGCTTCCCCATTTGAAAGTCCTCACACTGGTTTGTCTTGGCATCTGGGGTCCACTTCCTGGTAAGATTGCTCGATTGTCATCTCTGGAAATAGTTAATATGAGTTCGAATTTTCTATATGGTGTCATCCCTCAGGAGCTTTCATTATTGTCAAATCTTCAAACGCTCATTCTTGATGACAACATGTTATCTGGTGAGCTTCCAGATTGGCTTGATTCTCTTCCAGCCTTAACAGTGTTAAGTCTGAAAAATAATCTGTTCAATGGGTCTGTACCTGCTTCTTTGGGTAGCTTGGAAAATTTGAGGATTCTTTCACTTTCTCATAATCACTTTTCTGGAGCAGTACCCGATTTAAGGCATTTGACAAATCTTCAAGTGCTGGAGTTGGATGATAATGATTTTGGACCTCAGTTTCCTCGACTTGGTACCAAGTTGGTTACTCTTGTTCTAACAAACAATAGTTTCAGATCCAATGTCCCTGCTGAAGTGACCACGTTTCATCAGCTTGAGAGATTTGATATCTCATCAAATTCATTTGTGGGGCCATTCCACCCTGCATTGTTATCTCTCCCATCTATCACATATCTCAACATTTCTGGAAATCAACTCACTGGAATGCTTTTTGAAAATCAAACTTGCAGTTATGAACTCCAAGTCGTGGATCTTTCCTCGAATTTGTTGACTGGAAGCTTACCTGGATGTTTACAGTCAAAAAACAATGATAAGACTGTACTTTATGCTAGAAATTGTCTACAAGATATGAATCAAAATCAGCACCTACTTCCCTTTTGTCATACTGAAGCCTTAGCTGTGGGAATATTACCTCAGAGTAAGAAACACAAGGATCAATCTAAGGTTGGCCTTTCTCTTGGGATAGTGGGCGGGATTCTTGGAGGAGTAGTGCTTGTTGCCTTGGTTTTCTTCATTATTAGAAGAGGAAATGTCAGAAGCAACAATAAGAATCCCCCAACAAGACTAATATCACAGAGTGCAACTCCTAAATACTCATCTAAGCATCTTTCTGATGCCAGGTACATATCTCAAACAATGAAGTTGGCAACAGTTGGCTTGCCAAGTTATCGAACTTTCTCTCTGGAAGAGATTGTGGCAGCGACAAACAATTTTGACACATCTTCTTTCATGGGTGAAAGTTCTCAGGGACAGATGTACAGAGGCCGGCTGAGGGATGGTTTTCTTGTTGCTATAAGATGCGTGAAAATGAAAAAAAGATACAGCATTCATTACTTTATGCACCACATAGAACTGATATCACATCTCAGGCATCGCCATTTAGTCTGTGCCCTAGGACACTGCTTTGAATATTACTTAGAAGATTCAACTGTCAGCAGAATATTTCTTATCTTCGAATACGTTCCAAATGGCACACTCAGGAGCTGGATCTCAGCAGATAAGCGCTCAAGAAAATCACTTGGTTGGACCCAACGCATAGAAGCTGTGATTGGAGTAGCAAAGGGTATTCAGTATTTACTCACTGGCATTGTCCCAGGTGTATATTCAAACAATCTCAAAACGACAGATGTTTTAATGGATCAGAATCTTGGTTCAAAAATATGCACTTATAACCTGCCCTTTTTATCTGACATGGGAAAGGTTGAGCACGGAACTTCCTCCAGTGGCTCAAAAAATCCTAGCGTTGATAAAAGCGCAAAACATGAAGATAAGTCAGATATATACGATTTTGGAGCAATACTACTGGAAGTGATTCTGGGAAGGGCAGCCAAGTCAAGGAATGAAGTGCATGGTTTGAGGGTTCTGTTTCAAGCGAGCATAACAAGTGATGAGGAAGCTAGAAGGAGCATTGTAGATGCAGGAGTTCGCAAGTCATGCTTGGACCAATCGTTGAAGACGATGATGGAGATCTGTGCGAGGTGCCTGGCCAAAGATCCAGCAGAAAGGCCTTCCATCGAGGATGTTTTATGGAATTTGCAGTTTGCTGCTCAGGTTCAGGATGCATGGCGAGGGGAATCTCAAAGCAGTGAGGGATCTCCAGGCTCACCTTTTGAACCTCGACGACTCACCTTCCATTAG 3438 0.4218 MNRSYNAQKSRTLVLCHAGRSKGLPCVCLNVWVKRHRPSASIKGFRLCIICENGGGFGGTGKRQGRACEQGWLCEEIHRQEEEALPKDAVEPEDFGLSSDLQFFRPGNLFKENPRVTYTTIYQCDNFSVSLEGSCVLKLAKLRANKVFNAPCDASVLYPTTGGNIHEFTAITPCAVLDVLGPPYSKQDGRDCSYYRDHPYNAFSNGSAKDEDGSYYGWLEEIEVPENSEMDGIEYLGPPITEPDNREIDFYGHAESFAHSGDDEANWFLCSSGENEHIPVLKIRFDFGTLLSTSETFGLGLTQDNYFIKLNRPYCNCRVSAHDLGKPGFNSESICDLEDIFSQALSRIPHNSSSFPAYHLLMAEQFYLSKLFIFVTLILSINHSEQLQSSLPQTLLRIKRLLNFPSALSSWNSSTDFCSPDSDSSLTVVCYEDTITQLHIIGEKRASTLLKNFSTDAFVATLARLPHLKVLTLVCLGIWGPLPGKIARLSSLEIVNMSSNFLYGVIPQELSLLSNLQTLILDDNMLSGELPDWLDSLPALTVLSLKNNLFNGSVPASLGSLENLRILSLSHNHFSGAVPDLRHLTNLQVLELDDNDFGPQFPRLGTKLVTLVLTNNSFRSNVPAEVTTFHQLERFDISSNSFVGPFHPALLSLPSITYLNISGNQLTGMLFENQTCSYELQVVDLSSNLLTGSLPGCLQSKNNDKTVLYARNCLQDMNQNQHLLPFCHTEALAVGILPQSKKHKDQSKVGLSLGIVGGILGGVVLVALVFFIIRRGNVRSNNKNPPTRLISQSATPKYSSKHLSDARYISQTMKLATVGLPSYRTFSLEEIVAATNNFDTSSFMGESSQGQMYRGRLRDGFLVAIRCVKMKKRYSIHYFMHHIELISHLRHRHLVCALGHCFEYYLEDSTVSRIFLIFEYVPNGTLRSWISADKRSRKSLGWTQRIEAVIGVAKGIQYLLTGIVPGVYSNNLKTTDVLMDQNLGSKICTYNLPFLSDMGKVEHGTSSSGSKNPSVDKSAKHEDKSDIYDFGAILLEVILGRAAKSRNEVHGLRVLFQASITSDEEARRSIVDAGVRKSCLDQSLKTMMEICARCLAKDPAERPSIEDVLWNLQFAAQVQDAWRGESQSSEGSPGSPFEPRRLTFH 1145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0543 1145 SUPERFAMILY RmlC-like cupins 111 199 IPR011051 -
Lele06g0543 1145 MobiDBLite consensus disorder prediction 1123 1145 - -
Lele06g0543 1145 Pfam Leucine rich repeat 531 574 IPR001611 GO:0005515
Lele06g0543 1145 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 388 606 - -
Lele06g0543 1145 Gene3D Ribonuclease Inhibitor 603 721 IPR032675 -
Lele06g0543 1145 ProSiteProfiles Protein kinase domain profile. 838 1114 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele06g0543 1145 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 811 920 - -
Lele06g0543 1145 Gene3D Phosphorylase Kinase; domain 1 809 920 - -
Lele06g0543 1145 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 452 1112 - -
Lele06g0543 1145 Gene3D Ribonuclease Inhibitor 390 602 IPR032675 -
Lele06g0543 1145 SUPERFAMILY Protein kinase-like (PK-like) 817 1114 IPR011009 -
Lele06g0543 1145 SUPERFAMILY L domain-like 396 714 - -
Lele06g0543 1145 Pfam Protein tyrosine and serine/threonine kinase 843 1109 IPR001245 GO:0004672|GO:0006468
Lele06g0543 1145 ProSiteProfiles Leucine-rich repeat profile. 563 585 IPR001611 GO:0005515
Lele06g0543 1145 Gene3D Transferase(Phosphotransferase) domain 1 921 1130 - -
Lele06g0543 1145 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 921 1128 - -
Lele06g0543 1145 Pfam PCO_ADO 137 240 IPR012864 GO:0016702
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0543 Lele-ChrLele06 3251444 3261696 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0543 404 1133 Miscellaneous Gene Families AT3G03770 60.598 0.0 845
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Lele06g0543 PK_Tyr_Ser-Thr 4.3e-20 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0543 06 3251444 3261696 Lele07g0750 07 4248974 4253216 hybridization
Lele06g0543 06 3251444 3261696 Lele08g0547 08 3311887 3316739 hybridization