Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0522 ATGAATGATCTTCTAACGGATTCATTTGAGCTTCCTCGTGAGCAAGGTAATGGTGGTGGAGATATTGAGCTTGGGGCGAATGCAATGAATTCAGCAGATACGGGCTTAGATAACTTCTTCAAAAAGGTTCAGGAGCTTGATAAGCAATATGCAAAGCTGGATAAGCTTCTGAAAAAGCTCCAGGATGCCCATGAGGAGTCCAAAGCTGTAACCAAGGCTCCTGCCATGAAAAATATTAAGCAGAGAATGGAGAAAGACGTTGACGAGGTTAAGAAAATTGCCCATCATATCAAGACGAAAATTGAAGAACTTGACAAAGAGAATTTGGCAAATAGGCATAAGCCTGGGTGTGGAAAAGGATCAGCAGTTGACCGGTCAAGAACAGCAACAACTACTGCCTTGAGAAAGAAGCTGAAGGACAAGATGGCTGAATTTCAGGTCCTGCGTGAAGCCATCCATCAAGAATATCGTGAGGTTGTTGAGAGACGGGTCTTTACAGTAACTGGCACAAGAGCTGACGAGGAGACAATTGATAGATTAATTGAGACGGGAGACAGTGAGCAAATTTTCCAGAAGGCAATTCAGGAACAAGGAAGAGGCCAGATAATAGACACCCTGGCAGAAATTCAAGAACGGCACGAAGCAGTTAGAGATGTTGAGAGGAAACTTCTTGAATTACAACAGATATTCATGGACATAGCAGTGCTAGTTGATGCACAGGGGGATATGCTGGACAATATAGAATCACAGGTCTCAACTGCAGTGGATCACGTGCAGCAAGGCAACACTGCCCTCCAGAAAGCCAAAAGCCTACAGAAGAATTCTAGAAAATGGATGTGCATTGCAATCATAATACTCCTTATTGTTGTCATAATCATTGTCGTTGCCGTCATCAAACCATGGGTTAAGAAGGGTGCTTAG 921 0.4343 MNDLLTDSFELPREQGNGGGDIELGANAMNSADTGLDNFFKKVQELDKQYAKLDKLLKKLQDAHEESKAVTKAPAMKNIKQRMEKDVDEVKKIAHHIKTKIEELDKENLANRHKPGCGKGSAVDRSRTATTTALRKKLKDKMAEFQVLREAIHQEYREVVERRVFTVTGTRADEETIDRLIETGDSEQIFQKAIQEQGRGQIIDTLAEIQERHEAVRDVERKLLELQQIFMDIAVLVDAQGDMLDNIESQVSTAVDHVQQGNTALQKAKSLQKNSRKWMCIAIIILLIVVIIIVVAVIKPWVKKGA 306
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0522 306 Pfam Syntaxin 38 241 IPR006011 GO:0016020
Lele06g0522 306 Pfam SNARE domain 242 294 IPR000727 -
Lele06g0522 306 Gene3D - 199 299 - -
Lele06g0522 306 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 206 268 IPR000727 -
Lele06g0522 306 FunFam Syntaxin 132 31 160 - -
Lele06g0522 306 Coils Coil 87 107 - -
Lele06g0522 306 SUPERFAMILY t-snare proteins 34 261 IPR010989 GO:0016020|GO:0016192
Lele06g0522 306 CDD SynN 36 193 IPR006011 GO:0016020
Lele06g0522 306 Coils Coil 36 73 - -
Lele06g0522 306 PANTHER SYNTAXIN 34 289 IPR045242 -
Lele06g0522 306 SMART SynN_4 31 157 IPR006011 GO:0016020
Lele06g0522 306 CDD SNARE_syntaxin1-like 205 267 - -
Lele06g0522 306 MobiDBLite consensus disorder prediction 110 129 - -
Lele06g0522 306 FunFam Syntaxin 132 199 299 - -
Lele06g0522 306 SMART tSNARE_6 201 268 IPR000727 -
Lele06g0522 306 ProSitePatterns Syntaxin / epimorphin family signature. 212 251 IPR006012 GO:0005484|GO:0006886|GO:0016020
Lele06g0522 306 Gene3D - 32 160 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele06g0522 Lele-ChrLele06 3145538 3150613 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0522 1 306 SNARE and Associated Proteins AT3G03800 72.222 3.87e-154 431