Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0520 ATGAGGAGTCCAAGGGTAAAAGGGCAGATCACGCCATGTTGTAGCAAGGAAGGGATAAAGAGAGGACCATGGACGCCGGAGGAGGATGAGGTTCTGGCCAATTTCGTCAAGAAGGAAGGAGAAGGACGGTGGCGTACGCTTCCCAAGCGGGCGGGGCTGCAACGCTGCGGCAAGAGCTGCCGTCTCCGATGGATGAACTACCTTCGTCCCTCCGTCAAGAGAGGCCATATCGCTCCCGATGAGGAAGATCTCATCCTTCGCCTCCACCGCTTGCTGGGCAACAGGTGGTCTCTGATAGCTGGGAGGATACCTGGAAGGACCGATAACGAGATTAAGAACTACTGGAATACCCATCTCAGCAAGAAGCTCATAAGTCAGGGAATAGACCCTAGGACTCACAAGCCCTTACTCACTTTCGACAATAATTCCAAATCTCAACAAGCATATCATGAATCCACTGCAAGCACATCCAGTAATCCTCAATCATCTGCACCAGAGATTGTTAATCAGACAGATGCTATCCAAAATAACAGTACTTCTCTCACTGTTGGGAATAATTGGGGAACAAGTAGCGACAAAGTAGTGAGGCTCGAAAATGGGGTTGAAGTTCAAGAGGAGGTTGGGAAGATCATGGGTGAGGAAGATACACTATCTTCGTTTCTGGAATCTTTGATCAACGACAACGAAGTACTTGGGAATCAACAGACGCAGGCTGTCGACCACCACGTGTTTCCTGTTCCACCGCCACATCCAGTGGCGGCTTCTTCTTCGCAGCAATTTTTTGATCTTTCCTTTTGGGAAGCTGAATTCCAGAGTTTTGGAGGAGATCAACAGCATGGTTGCCCCTTCAGGTAA 855 0.4936 MRSPRVKGQITPCCSKEGIKRGPWTPEEDEVLANFVKKEGEGRWRTLPKRAGLQRCGKSCRLRWMNYLRPSVKRGHIAPDEEDLILRLHRLLGNRWSLIAGRIPGRTDNEIKNYWNTHLSKKLISQGIDPRTHKPLLTFDNNSKSQQAYHESTASTSSNPQSSAPEIVNQTDAIQNNSTSLTVGNNWGTSSDKVVRLENGVEVQEEVGKIMGEEDTLSSFLESLINDNEVLGNQQTQAVDHHVFPVPPPHPVAASSSQQFFDLSFWEAEFQSFGGDQQHGCPFR 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0520 284 FunFam Myb transcription factor 18 74 - -
Lele06g0520 284 SMART sant 73 121 IPR001005 -
Lele06g0520 284 SMART sant 20 70 IPR001005 -
Lele06g0520 284 FunFam transcription repressor MYB5-like 78 147 - -
Lele06g0520 284 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 11 189 - -
Lele06g0520 284 CDD SANT 23 68 IPR001005 -
Lele06g0520 284 CDD SANT 79 119 IPR001005 -
Lele06g0520 284 SUPERFAMILY Homeodomain-like 18 115 IPR009057 -
Lele06g0520 284 Gene3D - 21 73 - -
Lele06g0520 284 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 69 123 IPR017930 -
Lele06g0520 284 ProSiteProfiles Myb-like domain profile. 69 119 IPR001005 -
Lele06g0520 284 Pfam Myb-like DNA-binding domain 79 119 IPR001005 -
Lele06g0520 284 Pfam Myb-like DNA-binding domain 21 68 IPR001005 -
Lele06g0520 284 ProSiteProfiles Myb-like domain profile. 16 68 IPR001005 -
Lele06g0520 284 Gene3D - 78 159 - -
Lele06g0520 284 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 16 68 IPR017930 -
Lele06g0520 284 MobiDBLite consensus disorder prediction 144 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0520 Lele-ChrLele06 3139212 3140190 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0520 6 227 MYB Transcription Factor Family AT3G13540 58.559 3.32e-83 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele06g0520 Myb_DNA-binding 5.6e-15 CL0123