Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0507 ATGTTTCTCCTTTACCTACTATCCATATTCACATTTATACTGGAGATTGATTTTGAGGGTATGAGTTTAGGGAGGATCCGACTCCGATCGTCTTCGAGGTTTTCTGCTGTTTCTGGGGCGACTCAAGTGGGTTATGATTTGAATGGGGAGAGGATGCCAGAGTTGAGAAGTGGAGCTAGAAGATCGAAACGACTTGGTGATCTTCAGCCTGCCCCACTGCCTGTTGATCAAGGAGAGAATTGTGCACAACCTGCCCCAACTAGAGCCAGGAGGAGAGTTGGAGGTGGAAGAGGACGTGGTAATGTCACAACTGTAGCAAAAGGACCTTCACCAGCGGTACCCACAAGGCGAACTGCAGCTGGTCGAGGTCGGGGAGTAAGATTAATTAATCTTGACCCTGAACCTTGTGAGGTCCTTCCTGATCCAGTTGCACTAGGAGCCCCAGAACCCCTTGGTGTTGAGGCTGTGGCCAACAATAAAATTGTGATGGAAGGTGGAAGTGCAGACAAGGTGGTTGGAGCTGAAGAGGAAGCTACCACGACCCCTATTCCTGAGAGGGTTCAAGTTGGTAGTTCTCCTATGTATAAGATTGAAAGGAAATTGGGTAAGGGTGGTTTCGGTCAAGTGTATGTTGGCAGAAGGGTAAGTGGCGGCTCTGATCGGACAGGTCCTGATGCAATTGAGGTTGCACTGAAGTTTGAGCACAGAAATAGTAAAGGTTGCAATTATGGACCTCCTTATGAGTGGCAGGTCTACAATACTCTGAATGCATGTTATGGTATTCCCTCGGTTCATTACAAGGGTTGTCAAGGAGATTTTTATATTCTGGTGATGGACATGCTTGGACCCAGTCTTTGGGATGTATGGAATTCAGTTGGCCAATCGATGTCGCCAAATATGGTTGCCTGCATTGCAGTGGAAGCTATATCAATTCTTGAGAAGCTCCACATGAAAGGGTTTGTGCATGGAGATGTAAAACCAGAAAACTTCTTACTAGGTCAACCTGGATCAGCTGATGAGAAGAAGCTATATCTTATCGATCTTGGGTTGGCTTCAAAATGGAAAGATGCATCATCTGGTCAGCATGTTGAATATGACCAAAGACCTGATATTTTCAGGGGAACAATAAGGTATGCCAGCGTACATGCACATTTAGGTAGGACAGGAAGTCGAAGGGATGATCTTGAGTCACTGGCCTACACGCTAATATTTCTCATAAAAGGGAGGTTACCGTGGCAGGGTTATCAGGGTGACAATAAAAGTTTTCTCGTCTGTAAGAAGAAGATGTCCACTTCTCCAGAGTTAATGTGCTGCTTTTGTCCTGCCCCATTCAAACAGTTCCTTGAAGCTGTTACTAACATGAGATTTGATGAGGAGCCAAATTATTCCAAGCTTATATCTTTTTTTGAAAGCTTGATTGAACCATGTGTACCATTGAGACCAATCAGAATTGATGGAGCTTTAAAGGTTGGACAGAAGCGTGGGAGGATGCTTATTAACCTGGAAGAAGATGAGCAGCCAAAGAAGAAAGTACGCATGGGGAGTCCTGCGACACAGTGGATTTCAGTTTATAATGCTCGTCGTCCCATGAAGCAGAGGTATCATTACAATGTAGCAGACACAAGGCTTCGTCAGCATGTAGACAAGGGAAATGAGGATGGGTTGTATATCAGCTCTGTGGCCTCCTCAACAAATCTATGGGCCCTACTCATGGATGCAGGAACAGGTTTTTCTTCCCAGGTGTATGAATTGTCACCCGTCTTCTTGCATAAGGACTGGATTATGGAACAGTGGGAGAAAAATTATTATATCAGTTCAATAGCTGGTGCAACTAATGGGAGTTCCTTGGTCGTCATGTCCAAAGGAACTCCTTACACACAGCAATCCTACAAAGTGAGCGAATCATTTCCTTTCAAGTGGATCAATAAGAAGTGGAAAGAAGGATTCCATGTTACCTCCATGACTACTGCTGGCAGTCGCTGGGGTGTTGTAATGTCCAGGAATGCTGGGTATTCTGATCAGGTTGTGGAGCTCGACTTTTTATATCCAAGTGAAGGAATACATCGACGATGGGAAGGTGGCTACCGGATAACATCTATGGCTGCTACTGCTGATCAGGCAGCCTTTATACTGAGCATACCAAAACGCAAATTGCTTGATGAAACTCAAGAGACTCTGCGTACCTCTGCCTTCCCTAGCACCCATGTAAAGGAAAAATGGTCCAAGAATCTCTATATTGCATCAATTTGTTACGGGCGGACTGTTTGCTAG 2271 0.4509 MFLLYLLSIFTFILEIDFEGMSLGRIRLRSSSRFSAVSGATQVGYDLNGERMPELRSGARRSKRLGDLQPAPLPVDQGENCAQPAPTRARRRVGGGRGRGNVTTVAKGPSPAVPTRRTAAGRGRGVRLINLDPEPCEVLPDPVALGAPEPLGVEAVANNKIVMEGGSADKVVGAEEEATTTPIPERVQVGSSPMYKIERKLGKGGFGQVYVGRRVSGGSDRTGPDAIEVALKFEHRNSKGCNYGPPYEWQVYNTLNACYGIPSVHYKGCQGDFYILVMDMLGPSLWDVWNSVGQSMSPNMVACIAVEAISILEKLHMKGFVHGDVKPENFLLGQPGSADEKKLYLIDLGLASKWKDASSGQHVEYDQRPDIFRGTIRYASVHAHLGRTGSRRDDLESLAYTLIFLIKGRLPWQGYQGDNKSFLVCKKKMSTSPELMCCFCPAPFKQFLEAVTNMRFDEEPNYSKLISFFESLIEPCVPLRPIRIDGALKVGQKRGRMLINLEEDEQPKKKVRMGSPATQWISVYNARRPMKQRYHYNVADTRLRQHVDKGNEDGLYISSVASSTNLWALLMDAGTGFSSQVYELSPVFLHKDWIMEQWEKNYYISSIAGATNGSSLVVMSKGTPYTQQSYKVSESFPFKWINKKWKEGFHVTSMTTAGSRWGVVMSRNAGYSDQVVELDFLYPSEGIHRRWEGGYRITSMAATADQAAFILSIPKRKLLDETQETLRTSAFPSTHVKEKWSKNLYIASICYGRTVC 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0507 756 ProSitePatterns Protein kinases ATP-binding region signature. 201 232 IPR017441 GO:0005524
Lele06g0507 756 FunFam Casein kinase 1-like protein 167 515 - -
Lele06g0507 756 ProSiteProfiles Protein kinase domain profile. 195 473 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele06g0507 756 PANTHER CASEIN KINASE-RELATED 188 720 - -
Lele06g0507 756 Gene3D Transferase(Phosphotransferase) domain 1 165 513 - -
Lele06g0507 756 SUPERFAMILY Protein kinase-like (PK-like) 195 477 IPR011009 -
Lele06g0507 756 CDD STKc_CK1 194 469 - -
Lele06g0507 756 SMART serkin_6 195 469 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele06g0507 756 Pfam Protein kinase domain 195 430 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele06g0507 756 ProSitePatterns Serine/Threonine protein kinases active-site signature. 320 332 IPR008271 GO:0004672|GO:0006468
Lele06g0507 756 MobiDBLite consensus disorder prediction 59 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0507 Lele-ChrLele06 3076865 3083870 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0507 268 469 MAP Kinase Kinase Kinase AT3G27560 21.359 2.98e-07 51.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Lele06g0507 Pkinase 6.2e-16 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0507 06 3076865 3083870 Lele06g0507 06 3076865 3083870 ECH
Lele06g0507 06 3076865 3083870 Lele08g0515 08 3128896 3136889 hybridization