Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0497 ATGTTCATCTTCTTCAATTCTTCTGCTACATCAATTCGAAGAGAGAAATATCGAATAATCATGGAGGGTGGTGGGCGATGGTGCAACACGTGCTCAAACGTGGTGAGTCCAACGATGAGGGAAGGAGAGAACAACAAATGCCCAGTTTGTGGGTCAGAATTTACAGAGGCAACAATGGAGAGCCTGAGATCACCGGATCAAAACGAAGGAAGCGACTTGATGAGATCGGCTTCTGTGTTCTCTCTTTACGCGCCAATATTACTGGGCTTGATGAGTGCTCTTAGACCTGCTCTTGCAACCATCAGCAACAACAACAACAATGGTGGTTCCAGTTCAAGGGAGGAGGAAGACGGCGACGAGCAAGATCAGATAGAACAGCACGGTGACCTTGTGGTGAGAAGAAGGAGAAGAACATCGTCCACTTCTCTCATGCTTGTCTTTCGTCGTCTCCACGATAGGATGGCGACGCAGCCAGAATCTGATCAGAATAATACTAACACAGAAAACGATCATAGAAACAATAACGGCGGTGGTGGTGATAATAATAATAACGTGAATCTAAACGTTGTTGTGATTGATCCGTTCAACGAAGAGGCCTTGATTCTGAGAGGTCCTTCACAGGCTAGAAGTAGCACTCCGTTAATCGAGAATCCGATGGGGTCTCTAGGTGATTTTCTGGAGGGACCTGGATTTGGGGTATTACTGCAACATTTGACACAGAATAATGAGCCTAACAGGTATGTGAATAATGTGAACCAGCCGGCGCAGAAGGCGGCGATAGAAGAGATGCCGACGGTGACGACGGAGGAGAGTATGCAGTGCATAATATGTTTGGAGGATGCAGAGATTGGGAGTGAAGTGAAGGAGATGCCGTGTGGGCATAAGTTTCACAGTGACTGCATTGTCTCGTGGCTGAAACTTCGGAGTTCGTGCCCGGTTTGCAGGTTTCAGATGCCGTCCGACGATACCAAGGTGGAAGCCAACGGCGGACGTCGGAATGAAGGCGATCCGAGTAATGATCAGGTGATGGATAGAGAACAGAGAATGAGTTTTGGAAGAAGGAATTGGCTCTCCATATTGCAGCCATTTGATTACTTTCTTCCTTCGCCTTGA 1113 0.4744 MFIFFNSSATSIRREKYRIIMEGGGRWCNTCSNVVSPTMREGENNKCPVCGSEFTEATMESLRSPDQNEGSDLMRSASVFSLYAPILLGLMSALRPALATISNNNNNGGSSSREEEDGDEQDQIEQHGDLVVRRRRRTSSTSLMLVFRRLHDRMATQPESDQNNTNTENDHRNNNGGGGDNNNNVNLNVVVIDPFNEEALILRGPSQARSSTPLIENPMGSLGDFLEGPGFGVLLQHLTQNNEPNRYVNNVNQPAQKAAIEEMPTVTTEESMQCIICLEDAEIGSEVKEMPCGHKFHSDCIVSWLKLRSSCPVCRFQMPSDDTKVEANGGRRNEGDPSNDQVMDREQRMSFGRRNWLSILQPFDYFLPSP 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0497 370 MobiDBLite consensus disorder prediction 325 342 - -
Lele06g0497 370 ProSiteProfiles Zinc finger RING-type profile. 274 315 IPR001841 -
Lele06g0497 370 MobiDBLite consensus disorder prediction 102 135 - -
Lele06g0497 370 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 155 319 - -
Lele06g0497 370 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 240 321 IPR013083 -
Lele06g0497 370 MobiDBLite consensus disorder prediction 322 342 - -
Lele06g0497 370 SUPERFAMILY RING/U-box 265 320 - -
Lele06g0497 370 SMART ring_2 274 314 IPR001841 -
Lele06g0497 370 MobiDBLite consensus disorder prediction 153 184 - -
Lele06g0497 370 FunFam E3 ubiquitin-protein ligase RNF181 243 321 - -
Lele06g0497 370 MobiDBLite consensus disorder prediction 157 184 - -
Lele06g0497 370 Pfam Ring finger domain 273 315 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0497 Lele-ChrLele06 3025216 3026328 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0497 189 336 C3H Transcription Factor Family AT1G26800 33.557 3.75e-22 91.3